Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3238

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,734,357	+		Rru_A3237	0.27	+0.0
3,734,357	+		Rru_A3237	0.27	-0.3
3,734,357	+		Rru_A3237	0.27	+0.0
3,734,357	+		Rru_A3237	0.27	+0.0
3,734,357	+		Rru_A3237	0.27	+0.0
3,734,357	+		Rru_A3237	0.27	+1.5
3,734,357	+		Rru_A3237	0.27	+1.8
3,734,357	+		Rru_A3237	0.27	+1.3
3,734,357	+		Rru_A3237	0.27	+0.0
3,734,357	+		Rru_A3237	0.27	+1.5
3,734,358	-		Rru_A3237	0.27	+0.0
3,734,358	-		Rru_A3237	0.27	+1.3
3,734,358	-		Rru_A3237	0.27	+1.0
3,734,358	-		Rru_A3237	0.27	+0.0
3,734,358	-		Rru_A3237	0.27	+1.3
3,734,358	-		Rru_A3237	0.27	+1.2
3,734,358	-		Rru_A3237	0.27	+0.0
3,734,358	-		Rru_A3237	0.27	+0.0
3,734,504	+		Rru_A3237	0.37	+0.7
3,734,504	+		Rru_A3237	0.37	+1.0
3,734,505	-		Rru_A3237	0.37	+0.0
3,734,505	-		Rru_A3237	0.37	+0.0
3,734,505	-		Rru_A3237	0.37	+0.0
3,734,505	-		Rru_A3237	0.37	+1.2
3,734,505	-		Rru_A3237	0.37	+0.9
3,734,934	+		Rru_A3237	0.68	+1.2
3,734,934	+		Rru_A3237	0.68	+0.0
3,735,071	+		Rru_A3237	0.78	+1.0
3,735,072	-		Rru_A3237	0.78	+0.7
3,735,209	+		Rru_A3237	0.88	+1.1
3,735,358	+				+1.5
3,735,359	-				+0.0
3,735,359	-				+0.0
3,735,359	-				+1.0
3,735,359	-				+0.0
3,735,388	+		Rru_A3238	0.13	+0.0
3,735,388	+		Rru_A3238	0.13	+0.8
3,735,389	-		Rru_A3238	0.13	+0.0
3,735,389	-		Rru_A3238	0.13	+0.0
3,735,389	-		Rru_A3238	0.13	+1.0
3,735,389	-		Rru_A3238	0.13	+0.0
3,735,389	-		Rru_A3238	0.13	+0.7
3,735,574	+		Rru_A3238	0.89	+0.2
3,735,574	+		Rru_A3238	0.89	+0.0
3,735,575	-				-1.0
3,735,580	+				+0.4
3,735,581	-				+1.7
3,735,581	-				+1.8
3,735,619	+				+1.5
3,735,620	-				+1.6
3,735,701	-				+0.0
3,735,769	+				+0.8
3,735,769	+				-1.0
3,735,769	+				+1.2
3,735,770	-				+0.0
3,735,770	-				+1.5
3,735,770	-				+0.0
3,735,770	-				+0.0
3,735,770	-				+0.9
3,735,770	-				+0.9
3,735,770	-				+1.0
3,735,794	+		Rru_A3239	0.12	+0.9
3,735,794	+		Rru_A3239	0.12	+0.0
3,736,232	+		Rru_A3240	0.69	+0.0
3,736,232	+		Rru_A3240	0.69	+0.8
3,736,338	+				+1.2
3,736,338	+				+0.5
3,736,339	-				+0.5
3,736,339	-				+1.3
3,736,339	-				+1.0
3,736,339	-				+0.0
3,736,339	-				+1.9
3,736,348	+				+0.9
3,736,348	+				+1.2
3,736,348	+				+1.1
3,736,348	+				+0.0
3,736,349	-				+0.0
3,736,349	-				+0.0
3,736,349	-				+1.2
3,736,352	+				+0.0
3,736,352	+				-1.0
3,736,353	-				+0.7
3,736,353	-				+1.0
3,736,353	-				+2.0
3,736,353	-				+0.0
3,736,472	+				+0.9
3,736,496	-				+0.0
3,736,552	+				+1.4
3,736,552	+				+0.0
3,736,552	+				+2.4
3,736,552	+				+0.7
3,736,553	-				+0.9
3,736,553	-				+0.0
3,736,565	-				+0.0