Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3202

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,688,622	+		Rru_A3201	0.24	+1.2
3,688,623	-		Rru_A3201	0.24	+0.5
3,688,623	-		Rru_A3201	0.24	+1.2
3,688,623	-		Rru_A3201	0.24	+0.0
3,688,640	-		Rru_A3201	0.26	-0.1
3,688,640	-		Rru_A3201	0.26	+0.5
3,688,664	+		Rru_A3201	0.28	-1.0
3,688,664	+		Rru_A3201	0.28	+1.2
3,688,665	-		Rru_A3201	0.28	+0.0
3,688,665	-		Rru_A3201	0.28	+0.0
3,688,937	+		Rru_A3201	0.53	+1.4
3,688,937	+		Rru_A3201	0.53	+0.0
3,688,937	+		Rru_A3201	0.53	+0.0
3,688,937	+		Rru_A3201	0.53	+1.0
3,688,938	-		Rru_A3201	0.53	+0.0
3,688,938	-		Rru_A3201	0.53	-1.0
3,688,938	-		Rru_A3201	0.53	+0.0
3,688,938	-		Rru_A3201	0.53	+0.0
3,689,037	-		Rru_A3201	0.63	+3.3
3,689,057	-		Rru_A3201	0.64	+0.0
3,689,264	-		Rru_A3201	0.84	+0.0
3,689,264	-		Rru_A3201	0.84	+0.0
3,691,860	+		Rru_A3202	0.82	+0.0
3,691,860	+		Rru_A3202	0.82	+0.0
3,691,860	+		Rru_A3202	0.82	+0.0
3,691,860	+		Rru_A3202	0.82	+0.0
3,691,862	+		Rru_A3202	0.82	-1.0
3,691,881	+		Rru_A3202	0.83	+0.0
3,691,881	+		Rru_A3202	0.83	+0.0
3,691,881	+		Rru_A3202	0.83	+0.0
3,691,881	+		Rru_A3202	0.83	+0.0
3,691,882	-		Rru_A3202	0.83	+0.0
3,691,882	-		Rru_A3202	0.83	+0.0
3,691,883	+		Rru_A3202	0.83	+0.0
3,691,883	+		Rru_A3202	0.83	-1.0
3,692,052	+		Rru_A3202	0.89	-0.0
3,692,052	+		Rru_A3202	0.89	-0.4
3,692,052	+		Rru_A3202	0.89	-0.4
3,692,052	+		Rru_A3202	0.89	-0.3
3,692,052	+		Rru_A3202	0.89	+0.8
3,692,109	+				-3.1
3,692,109	+				-0.3
3,692,109	+				-1.0
3,692,109	+				+0.0
3,692,109	+				-1.5
3,692,110	-				+0.0
3,692,110	-				-0.5
3,692,110	-				+0.0
3,692,110	-				+0.0
3,692,110	-				+0.0
3,692,110	-				-1.0
3,692,110	-				-1.0
3,692,508	+				+0.5
3,692,674	-		Rru_A3203	0.11	+0.0
3,693,064	+		Rru_A3203	0.27	-1.5
3,693,065	-		Rru_A3203	0.27	+1.0
3,693,065	-		Rru_A3203	0.27	+0.0
3,693,065	-		Rru_A3203	0.27	+1.8