Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3194

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,682,287	+				+1.1
3,682,287	+				+0.5
3,682,287	+				+0.6
3,682,287	+				+0.9
3,682,288	-				+0.7
3,682,288	-				+0.0
3,682,288	-				+0.0
3,682,289	+				+1.4
3,682,289	+				+0.0
3,682,289	+				+0.0
3,682,289	+				+0.0
3,682,290	-				+0.7
3,682,290	-				+1.5
3,682,290	-				+0.6
3,682,339	+				+0.9
3,682,340	-				+0.0
3,682,340	-				+0.0
3,682,417	+		Rru_A3193	0.17	+0.9
3,682,417	+		Rru_A3193	0.17	+0.8
3,682,418	-		Rru_A3193	0.17	+0.9
3,682,418	-		Rru_A3193	0.17	+1.0
3,682,525	+		Rru_A3193	0.33	+0.6
3,682,525	+		Rru_A3193	0.33	-0.3
3,682,526	-		Rru_A3193	0.33	-1.0
3,682,526	-		Rru_A3193	0.33	+0.7
3,682,801	+		Rru_A3193	0.74	+0.5
3,682,801	+		Rru_A3193	0.74	+1.2
3,682,801	+		Rru_A3193	0.74	+2.9
3,682,801	+		Rru_A3193	0.74	-1.0
3,682,801	+		Rru_A3193	0.74	+1.0
3,682,801	+		Rru_A3193	0.74	+0.9
3,682,801	+		Rru_A3193	0.74	+0.4
3,682,801	+		Rru_A3193	0.74	+1.3
3,682,802	-		Rru_A3193	0.75	+1.0
3,682,802	-		Rru_A3193	0.75	+0.5
3,682,802	-		Rru_A3193	0.75	+1.6
3,682,802	-		Rru_A3193	0.75	+0.8
3,682,802	-		Rru_A3193	0.75	+0.0
3,682,802	-		Rru_A3193	0.75	+0.0
3,682,864	+		Rru_A3193	0.84	+0.3
3,682,864	+		Rru_A3193	0.84	+0.0
3,682,864	+		Rru_A3193	0.84	+0.8
3,682,864	+		Rru_A3193	0.84	+1.3
3,682,864	+		Rru_A3193	0.84	+0.0
3,682,864	+		Rru_A3193	0.84	+1.0
3,682,865	-		Rru_A3193	0.84	+0.0
3,682,865	-		Rru_A3193	0.84	+2.4
3,682,865	-		Rru_A3193	0.84	+1.5
3,682,865	-		Rru_A3193	0.84	+0.6
3,682,865	-		Rru_A3193	0.84	+1.0
3,682,865	-		Rru_A3193	0.84	+0.0
3,682,867	-		Rru_A3193	0.84	+0.0
3,682,945	+				+0.9
3,682,946	-				-1.0
3,682,946	-				+0.0
3,683,242	-		Rru_A3194	0.24	+0.0
3,683,242	-		Rru_A3194	0.24	+0.0
3,683,514	+		Rru_A3194	0.48	+0.0
3,683,538	+		Rru_A3194	0.50	+1.0
3,683,871	-		Rru_A3194	0.80	+0.0
3,683,871	-		Rru_A3194	0.80	+1.2
3,683,883	+		Rru_A3194	0.81	+0.0
3,683,884	-		Rru_A3194	0.81	-0.4
3,684,154	-				+0.8
3,684,154	-				+1.0
3,684,157	+				+2.6
3,684,157	+				+1.3
3,684,157	+				+1.9
3,684,157	+				+1.4
3,684,157	+				-1.0
3,684,157	+				+0.4
3,684,158	-				+0.0
3,684,158	-				+0.8
3,684,158	-				+0.6
3,684,158	-				+1.6
3,684,158	-				+0.0
3,684,158	-				+1.0
3,684,158	-				+0.0
3,684,159	+				-0.4
3,684,159	+				+1.2
3,684,159	+				+0.0
3,684,159	+				+1.0
3,684,159	+				+1.0
3,684,159	+				+0.8
3,684,160	-				+0.0
3,684,160	-				-1.0
3,684,160	-				+0.0
3,684,160	-				+0.0
3,684,160	-				+1.7
3,684,164	+				+1.0
3,684,164	+				+0.0
3,684,164	+				+0.0
3,684,164	+				+0.0
3,684,165	-				+1.1
3,684,165	-				+1.6
3,684,165	-				+0.6
3,684,165	-				+1.2
3,684,165	-				+1.5
3,684,165	-				+0.6
3,684,166	+				+2.7
3,684,166	+				+1.0
3,684,167	-				+1.2
3,684,167	-				+0.0
3,684,167	-				+1.0
3,684,167	-				+1.2
3,684,277	-		Rru_A3195	0.36	+0.0
3,684,277	-		Rru_A3195	0.36	+0.0
3,684,277	-		Rru_A3195	0.36	-1.0
3,684,277	-		Rru_A3195	0.36	+0.5
3,684,277	-		Rru_A3195	0.36	+0.0
3,684,325	-		Rru_A3195	0.58	+0.0
3,684,402	+				+1.3
3,684,402	+				+1.4
3,684,608	+		Rru_A3196	0.76	+0.1
3,684,608	+		Rru_A3196	0.76	+1.6
3,684,608	+		Rru_A3196	0.76	+0.1
3,684,608	+		Rru_A3196	0.76	+0.1
3,684,608	+		Rru_A3196	0.76	+1.2
3,684,609	-		Rru_A3196	0.76	+2.3
3,684,710	-				+0.0
3,684,710	-				+0.0
3,684,752	+		Rru_A3197	0.14	+1.2
3,684,753	-		Rru_A3197	0.14	+1.8
3,684,753	-		Rru_A3197	0.14	+1.1
3,684,753	-		Rru_A3197	0.14	+1.3
3,684,753	-		Rru_A3197	0.14	+0.8
3,684,819	-		Rru_A3197	0.35	+0.0