Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3179

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,670,110	-				+1.2
3,670,727	-				+0.0
3,670,847	-		Rru_A3179	0.19	+0.0
3,670,847	-		Rru_A3179	0.19	+0.7
3,670,847	-		Rru_A3179	0.19	+1.8
3,670,886	+		Rru_A3179	0.26	+0.9
3,670,886	+		Rru_A3179	0.26	+1.3
3,670,887	-		Rru_A3179	0.26	+0.5
3,671,068	+		Rru_A3179	0.55	+0.0
3,671,069	-		Rru_A3179	0.55	+1.0
3,671,069	-		Rru_A3179	0.55	+1.1
3,671,069	-		Rru_A3179	0.55	-1.0
3,671,282	-		Rru_A3179	0.89	+0.0
3,671,351	+				+1.4
3,671,435	-				+1.7
3,671,458	+				-1.0
3,671,463	+				+1.0
3,671,463	+				+0.4
3,671,464	-				+2.3
3,671,465	+				+0.0
3,671,466	-				+0.0
3,671,549	+				+0.0
3,671,550	-				+1.4
3,671,550	-				+1.0
3,671,550	-				+1.1
3,671,717	+		Rru_A3180	0.12	+0.0
3,671,717	+		Rru_A3180	0.12	+0.8
3,671,718	-		Rru_A3180	0.12	+0.9
3,671,718	-		Rru_A3180	0.12	+1.8
3,671,760	+		Rru_A3180	0.15	+0.9
3,671,761	-		Rru_A3180	0.15	-0.2
3,671,761	-		Rru_A3180	0.15	+0.0
3,671,890	-		Rru_A3180	0.26	+1.2
3,671,916	+		Rru_A3180	0.28	+1.3
3,671,917	-		Rru_A3180	0.28	-0.6
3,671,917	-		Rru_A3180	0.28	+1.8
3,671,994	-		Rru_A3180	0.35	+1.1
3,672,144	+		Rru_A3180	0.48	+0.0
3,672,144	+		Rru_A3180	0.48	+1.0
3,672,145	-		Rru_A3180	0.48	+0.0
3,672,145	-		Rru_A3180	0.48	+0.0
3,672,145	-		Rru_A3180	0.48	+0.9
3,672,145	-		Rru_A3180	0.48	+2.2