Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3118

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,595,018	+				+0.0
3,595,019	-				+0.0
3,595,232	-		Rru_A3117	0.34	+0.8
3,595,232	-		Rru_A3117	0.34	+1.1
3,595,336	+		Rru_A3117	0.51	-1.0
3,595,336	+		Rru_A3117	0.51	+1.7
3,595,336	+		Rru_A3117	0.51	+0.6
3,595,336	+		Rru_A3117	0.51	+0.0
3,595,336	+		Rru_A3117	0.51	-1.0
3,595,337	-		Rru_A3117	0.51	+0.0
3,595,368	+		Rru_A3117	0.56	+0.9
3,595,368	+		Rru_A3117	0.56	+0.9
3,595,369	-		Rru_A3117	0.56	+1.5
3,595,513	+		Rru_A3117	0.79	+0.0
3,595,513	+		Rru_A3117	0.79	+0.0
3,595,513	+		Rru_A3117	0.79	+0.7
3,595,513	+		Rru_A3117	0.79	-0.5
3,595,513	+		Rru_A3117	0.79	+0.4
3,595,513	+		Rru_A3117	0.79	+0.0
3,595,513	+		Rru_A3117	0.79	+1.0
3,595,514	-		Rru_A3117	0.79	+0.0
3,595,514	-		Rru_A3117	0.79	-1.0
3,595,649	+				+1.0
3,595,711	-				+1.4
3,595,711	-				+0.0
3,595,738	+				+1.3
3,595,790	-				+0.0
3,595,791	+				+1.2
3,595,856	+				+1.4
3,595,886	+				+1.2
3,595,886	+				-1.0
3,595,886	+				+1.0
3,595,887	-				+0.0
3,596,087	+				+0.0
3,596,087	+				+0.0
3,596,087	+				+1.1
3,596,087	+				+0.0
3,596,088	-				+0.0
3,596,088	-				+0.0
3,596,088	-				+0.0
3,596,108	+				+0.7
3,596,108	+				+1.6
3,596,109	-				+0.0
3,596,109	-				+0.0
3,596,109	-				+1.5
3,596,109	-				+1.6
3,596,109	-				+1.7
3,596,109	-				+0.0
3,596,300	-		Rru_A3118	0.21	+0.0
3,596,300	-		Rru_A3118	0.21	+2.1
3,596,326	+		Rru_A3118	0.23	+1.0
3,596,327	-		Rru_A3118	0.23	-1.0
3,596,338	+		Rru_A3118	0.24	+1.3
3,596,338	+		Rru_A3118	0.24	+0.8
3,596,574	-		Rru_A3118	0.39	+0.0
3,596,769	-		Rru_A3118	0.51	+1.2
3,597,281	+		Rru_A3118	0.83	+0.9
3,597,281	+		Rru_A3118	0.83	+0.0
3,597,282	-		Rru_A3118	0.83	-1.6
3,597,282	-		Rru_A3118	0.83	+0.0
3,597,282	-		Rru_A3118	0.83	+1.3
3,597,282	-		Rru_A3118	0.83	+0.0
3,597,282	-		Rru_A3118	0.83	+0.0
3,597,282	-		Rru_A3118	0.83	+0.0
3,597,283	+		Rru_A3118	0.83	+2.2
3,597,284	-		Rru_A3118	0.83	+0.0
3,597,284	-		Rru_A3118	0.83	+1.3
3,597,284	-		Rru_A3118	0.83	+1.6
3,597,291	-		Rru_A3118	0.83	-1.6
3,597,443	+				+0.0
3,597,443	+				+0.0
3,597,443	+				-0.1
3,597,444	-				+1.0
3,597,576	-				+0.0
3,597,584	+				+1.3
3,597,585	-				+0.6
3,597,585	-				+1.0
3,598,211	+		Rru_A3119	0.64	+1.6
3,598,211	+		Rru_A3119	0.64	+0.0
3,598,211	+		Rru_A3119	0.64	+0.9
3,598,211	+		Rru_A3119	0.64	+1.3
3,598,211	+		Rru_A3119	0.64	+1.3
3,598,212	-		Rru_A3119	0.65	+0.7
3,598,552	-				+0.0
3,598,552	-				+0.4
3,598,552	-				+0.0
3,598,552	-				+0.0
3,598,554	+				+0.0
3,598,554	+				+1.5
3,598,555	-				+0.0
3,598,555	-				+1.0