Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3103

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,571,040	-		Rru_A3102	0.34	+0.5
3,571,040	-		Rru_A3102	0.34	+0.0
3,571,049	-		Rru_A3102	0.35	+0.9
3,571,288	+		Rru_A3102	0.51	+0.8
3,571,288	+		Rru_A3102	0.51	+0.0
3,571,288	+		Rru_A3102	0.51	+1.7
3,571,289	-		Rru_A3102	0.52	+0.0
3,571,289	-		Rru_A3102	0.52	+0.0
3,571,289	-		Rru_A3102	0.52	+0.0
3,571,507	+		Rru_A3102	0.67	+0.0
3,571,508	-		Rru_A3102	0.67	+0.0
3,571,617	+		Rru_A3102	0.74	+1.0
3,571,771	+		Rru_A3102	0.85	+0.0
3,571,772	-		Rru_A3102	0.85	+1.1
3,571,772	-		Rru_A3102	0.85	+0.8
3,571,825	+		Rru_A3102	0.88	+0.0
3,571,825	+		Rru_A3102	0.88	-0.7
3,571,826	-		Rru_A3102	0.88	+0.7
3,571,826	-		Rru_A3102	0.88	+0.0
3,571,826	-		Rru_A3102	0.88	+0.7
3,571,826	-		Rru_A3102	0.88	+1.0
3,571,879	+				+1.3
3,571,879	+				+0.8
3,571,879	+				+0.0
3,571,880	-				+0.0
3,571,880	-				+0.7
3,571,882	+				+0.4
3,571,882	+				+0.7
3,571,882	+				+0.9
3,571,882	+				+0.5
3,571,882	+				-0.1
3,571,883	-				-1.0
3,571,883	-				+1.8
3,571,946	+				+1.0
3,571,947	-				+0.0
3,571,991	-				+0.0
3,572,370	-		Rru_A3103	0.18	+0.0
3,572,387	-		Rru_A3103	0.18	+1.0
3,572,387	-		Rru_A3103	0.18	+1.2
3,572,503	+		Rru_A3103	0.24	+1.8
3,572,504	-		Rru_A3103	0.24	+2.4
3,572,504	-		Rru_A3103	0.24	+1.2
3,572,692	+		Rru_A3103	0.33	+1.6
3,572,692	+		Rru_A3103	0.33	+0.6
3,572,692	+		Rru_A3103	0.33	+1.8
3,572,692	+		Rru_A3103	0.33	+1.0
3,572,692	+		Rru_A3103	0.33	+0.9
3,572,693	-		Rru_A3103	0.33	+1.3
3,572,693	-		Rru_A3103	0.33	+1.4
3,572,693	-		Rru_A3103	0.33	+1.6
3,572,719	+		Rru_A3103	0.34	+0.0
3,572,719	+		Rru_A3103	0.34	+0.7
3,572,722	+		Rru_A3103	0.35	+1.0
3,572,722	+		Rru_A3103	0.35	+1.4
3,572,723	-		Rru_A3103	0.35	+1.0
3,572,723	-		Rru_A3103	0.35	+1.0
3,572,866	+		Rru_A3103	0.42	+1.6
3,572,873	-		Rru_A3103	0.42	+0.0
3,572,873	-		Rru_A3103	0.42	+0.9
3,573,306	-		Rru_A3103	0.63	-1.6
3,573,306	-		Rru_A3103	0.63	+0.6
3,573,306	-		Rru_A3103	0.63	+0.0
3,573,337	+		Rru_A3103	0.64	-0.9
3,573,338	-		Rru_A3103	0.64	+1.4
3,573,965	+				+0.7
3,574,238	-		Rru_A3104	0.12	+0.7
3,574,238	-		Rru_A3104	0.12	+1.3
3,574,383	+		Rru_A3104	0.23	+1.3
3,574,384	-		Rru_A3104	0.23	+0.0
3,574,384	-		Rru_A3104	0.23	+0.8
3,574,384	-		Rru_A3104	0.23	+1.3
3,574,384	-		Rru_A3104	0.23	+0.0
3,574,384	-		Rru_A3104	0.23	+1.0
3,574,392	+		Rru_A3104	0.24	+0.6
3,574,393	-		Rru_A3104	0.24	+1.7
3,574,989	+		Rru_A3104	0.68	-0.2
3,574,989	+		Rru_A3104	0.68	+1.2
3,574,989	+		Rru_A3104	0.68	+1.6
3,574,990	-		Rru_A3104	0.68	+1.5
3,574,990	-		Rru_A3104	0.68	+1.1
3,574,990	-		Rru_A3104	0.68	+1.3
3,574,990	-		Rru_A3104	0.68	+0.0
3,574,992	+		Rru_A3104	0.68	+0.0
3,575,067	+		Rru_A3104	0.74	+0.4
3,575,067	+		Rru_A3104	0.74	+0.0
3,575,068	-		Rru_A3104	0.74	+1.0