Strain Fitness in Rhodospirillum rubrum S1H around Rru_A3095

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,560,835	+		Rru_A3094	0.69	+1.1
3,560,836	-		Rru_A3094	0.69	+0.0
3,561,019	+		Rru_A3094	0.82	+0.0
3,561,020	-		Rru_A3094	0.82	+0.0
3,561,020	-		Rru_A3094	0.82	+0.0
3,561,020	-		Rru_A3094	0.82	+0.0
3,561,132	+				+0.7
3,561,132	+				+0.4
3,561,133	-				-0.2
3,561,133	-				+2.1
3,561,189	+				+0.0
3,561,190	-				+0.0
3,561,190	-				+0.5
3,561,190	-				+0.0
3,561,190	-				-1.0
3,561,190	-				+0.1
3,561,230	+				+1.1
3,561,231	-				+0.7
3,561,432	+				+0.0
3,561,578	-				+0.4
3,561,729	-				+0.0
3,561,830	+				+0.0
3,561,830	+				+0.0
3,561,831	-				+1.2
3,561,831	-				+0.0
3,561,910	+				+1.1
3,561,911	-				+1.5
3,561,911	-				+0.8
3,561,943	+		Rru_A3095	0.13	+0.0
3,561,944	-		Rru_A3095	0.13	+0.0
3,561,944	-		Rru_A3095	0.13	+0.0
3,561,946	+		Rru_A3095	0.13	+0.0
3,561,946	+		Rru_A3095	0.13	+0.8
3,561,946	+		Rru_A3095	0.13	+0.0
3,561,947	-		Rru_A3095	0.13	+1.0
3,561,947	-		Rru_A3095	0.13	+0.0
3,562,067	-		Rru_A3095	0.25	+0.6
3,562,366	+		Rru_A3095	0.56	+1.2
3,562,366	+		Rru_A3095	0.56	+0.3
3,562,366	+		Rru_A3095	0.56	-1.0
3,562,367	-		Rru_A3095	0.56	+0.6
3,562,367	-		Rru_A3095	0.56	+0.0
3,562,367	-		Rru_A3095	0.56	+1.2
3,562,371	+		Rru_A3095	0.56	+1.6
3,562,372	-		Rru_A3095	0.56	+1.2
3,562,408	+		Rru_A3095	0.60	+0.0
3,562,408	+		Rru_A3095	0.60	-0.4
3,562,408	+		Rru_A3095	0.60	+0.0
3,562,408	+		Rru_A3095	0.60	+1.2
3,562,408	+		Rru_A3095	0.60	+1.1
3,562,409	-		Rru_A3095	0.60	+1.4
3,562,518	+		Rru_A3095	0.71	+0.0
3,562,519	-		Rru_A3095	0.71	-1.6
3,562,826	+				+0.0
3,562,827	-				+0.9
3,562,827	-				+0.0
3,562,827	-				+0.8
3,562,827	-				+0.7
3,562,827	-				+0.9
3,562,892	+				+0.0
3,562,892	+				+0.0
3,562,892	+				+0.0
3,562,892	+				+0.0
3,562,893	-				+0.7
3,562,893	-				+0.0
3,563,040	-				+0.1
3,563,158	+				+0.3
3,563,296	+		Rru_A3096	0.18	-1.0
3,563,305	+		Rru_A3096	0.19	+0.7
3,563,482	+		Rru_A3096	0.33	+0.0
3,563,482	+		Rru_A3096	0.33	+1.4
3,563,483	-		Rru_A3096	0.33	+1.1
3,563,483	-		Rru_A3096	0.33	-1.0
3,563,489	-		Rru_A3096	0.33	+0.5
3,563,548	-		Rru_A3096	0.38	+0.0
3,563,565	+		Rru_A3096	0.39	+0.0
3,563,566	-		Rru_A3096	0.39	+0.7
3,563,585	-		Rru_A3096	0.40	+0.8