Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2972

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,421,679	+		Rru_A2971	0.39	+1.4
3,421,679	+		Rru_A2971	0.39	+0.8
3,421,680	-		Rru_A2971	0.39	+1.4
3,421,680	-		Rru_A2971	0.39	+1.2
3,421,715	+		Rru_A2971	0.41	+0.0
3,421,715	+		Rru_A2971	0.41	+1.7
3,421,716	-		Rru_A2971	0.42	+0.0
3,421,716	-		Rru_A2971	0.42	+0.0
3,421,755	+		Rru_A2971	0.45	+0.4
3,421,755	+		Rru_A2971	0.45	+0.0
3,421,755	+		Rru_A2971	0.45	+0.7
3,421,755	+		Rru_A2971	0.45	+0.8
3,421,755	+		Rru_A2971	0.45	+0.6
3,421,756	-		Rru_A2971	0.45	+1.3
3,421,756	-		Rru_A2971	0.45	+0.4
3,421,756	-		Rru_A2971	0.45	+0.9
3,421,757	+		Rru_A2971	0.45	+1.2
3,422,156	+		Rru_A2971	0.77	+1.1
3,422,156	+		Rru_A2971	0.77	+1.5
3,422,156	+		Rru_A2971	0.77	+1.2
3,422,156	+		Rru_A2971	0.77	+1.4
3,422,156	+		Rru_A2971	0.77	+0.9
3,422,157	-		Rru_A2971	0.77	+2.3
3,422,157	-		Rru_A2971	0.77	+0.2
3,422,157	-		Rru_A2971	0.77	+1.4
3,422,157	-		Rru_A2971	0.77	+0.7
3,422,249	+		Rru_A2971	0.85	+1.1
3,422,250	-		Rru_A2971	0.85	+1.0
3,422,250	-		Rru_A2971	0.85	+0.3
3,422,492	+				+0.0
3,422,492	+				+0.0
3,422,492	+				+1.7
3,422,492	+				-1.0
3,422,492	+				+0.0
3,422,493	-				+1.1
3,422,493	-				+0.3
3,422,493	-				+0.0
3,422,493	-				+0.0
3,422,840	+		Rru_A2972	0.14	+0.0
3,422,841	-		Rru_A2972	0.14	+1.4
3,422,841	-		Rru_A2972	0.14	-1.0
3,423,008	+		Rru_A2972	0.26	+0.0
3,423,009	-		Rru_A2972	0.26	+0.0
3,423,193	-		Rru_A2972	0.39	+0.0
3,423,209	+		Rru_A2972	0.41	+0.5
3,423,209	+		Rru_A2972	0.41	+0.8
3,423,209	+		Rru_A2972	0.41	+0.0
3,423,211	+		Rru_A2972	0.41	-1.6
3,423,211	+		Rru_A2972	0.41	+0.0
3,423,211	+		Rru_A2972	0.41	+0.9
3,423,211	+		Rru_A2972	0.41	+0.0
3,423,212	-		Rru_A2972	0.41	+0.0
3,423,212	-		Rru_A2972	0.41	+1.0
3,423,278	+		Rru_A2972	0.46	-1.0
3,423,279	-		Rru_A2972	0.46	+0.0
3,423,279	-		Rru_A2972	0.46	+0.4
3,423,279	-		Rru_A2972	0.46	+1.5
3,423,279	-		Rru_A2972	0.46	+0.8
3,423,287	+		Rru_A2972	0.46	+1.2
3,423,287	+		Rru_A2972	0.46	+0.0
3,423,288	-		Rru_A2972	0.46	-1.0
3,423,290	+		Rru_A2972	0.47	+0.0
3,423,368	+		Rru_A2972	0.52	+0.0
3,423,368	+		Rru_A2972	0.52	+1.3
3,423,503	+		Rru_A2972	0.62	+0.9
3,423,503	+		Rru_A2972	0.62	+0.0
3,423,503	+		Rru_A2972	0.62	+0.0
3,423,503	+		Rru_A2972	0.62	+0.0
3,423,503	+		Rru_A2972	0.62	+0.0
3,423,503	+		Rru_A2972	0.62	+1.5
3,423,504	-		Rru_A2972	0.62	+0.0
3,423,599	+		Rru_A2972	0.69	+1.1
3,423,599	+		Rru_A2972	0.69	+0.0
3,423,600	-		Rru_A2972	0.69	-1.0
3,423,600	-		Rru_A2972	0.69	+0.0
3,423,601	+		Rru_A2972	0.69	+0.8
3,423,601	+		Rru_A2972	0.69	+1.3
3,423,601	+		Rru_A2972	0.69	+1.2
3,423,601	+		Rru_A2972	0.69	+0.0
3,423,602	-		Rru_A2972	0.69	-0.2
3,423,602	-		Rru_A2972	0.69	+0.0
3,423,602	-		Rru_A2972	0.69	+0.0
3,423,602	-		Rru_A2972	0.69	+1.3
3,423,602	-		Rru_A2972	0.69	+0.7
3,423,689	+		Rru_A2972	0.75	+1.0
3,423,689	+		Rru_A2972	0.75	+1.2
3,423,690	-		Rru_A2972	0.76	+0.0
3,423,827	+		Rru_A2972	0.85	+1.5
3,423,827	+		Rru_A2972	0.85	+0.0
3,423,922	+				+0.0
3,423,923	-				-1.0
3,423,923	-				+1.4
3,424,142	-				+0.0
3,424,148	+				+1.4
3,424,148	+				+0.0
3,424,149	-				+1.0
3,424,149	-				+0.9
3,424,276	+		Rru_A2973	0.18	+0.0
3,424,277	-		Rru_A2973	0.18	+1.4
3,424,277	-		Rru_A2973	0.18	+0.0
3,424,375	-		Rru_A2973	0.25	+1.3
3,424,555	+		Rru_A2973	0.39	+1.1
3,424,556	-		Rru_A2973	0.39	+0.8
3,424,556	-		Rru_A2973	0.39	+0.7
3,424,556	-		Rru_A2973	0.39	+0.2
3,424,691	+		Rru_A2973	0.49	+1.2
3,424,691	+		Rru_A2973	0.49	+0.0
3,424,692	-		Rru_A2973	0.49	+1.5
3,424,692	-		Rru_A2973	0.49	+0.0
3,424,873	+		Rru_A2973	0.62	+0.0
3,424,873	+		Rru_A2973	0.62	-1.6
3,424,873	+		Rru_A2973	0.62	+1.7
3,424,874	-		Rru_A2973	0.63	+0.9
3,424,885	+		Rru_A2973	0.63	+1.0
3,424,885	+		Rru_A2973	0.63	+0.7
3,424,885	+		Rru_A2973	0.63	+2.8
3,424,885	+		Rru_A2973	0.63	+1.1
3,424,885	+		Rru_A2973	0.63	+1.4
3,424,885	+		Rru_A2973	0.63	+0.0
3,424,886	-		Rru_A2973	0.63	+1.1
3,424,886	-		Rru_A2973	0.63	+1.6
3,424,886	-		Rru_A2973	0.63	+0.5
3,424,886	-		Rru_A2973	0.63	+1.2
3,424,886	-		Rru_A2973	0.63	+0.0
3,424,954	+		Rru_A2973	0.69	+0.1
3,424,963	+		Rru_A2973	0.69	+0.0
3,424,964	-		Rru_A2973	0.69	+1.6
3,424,964	-		Rru_A2973	0.69	+0.0
3,424,965	+		Rru_A2973	0.69	+0.0
3,424,966	-		Rru_A2973	0.69	-1.0
3,424,966	-		Rru_A2973	0.69	+2.2
3,424,966	-		Rru_A2973	0.69	+0.0
3,424,975	+		Rru_A2973	0.70	+1.6
3,424,976	-		Rru_A2973	0.70	+1.1