Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2873

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,308,200	+				+0.3
3,308,420	+		Rru_A2872	0.36	+0.9
3,308,421	-		Rru_A2872	0.36	-0.0
3,308,421	-		Rru_A2872	0.36	-1.6
3,308,421	-		Rru_A2872	0.36	+0.6
3,308,421	-		Rru_A2872	0.36	+3.0
3,308,432	+		Rru_A2872	0.39	+0.8
3,308,701	+				+2.3
3,308,701	+				-0.0
3,308,701	+				+0.8
3,308,702	-				-0.0
3,308,702	-				-0.0
3,308,721	+				-0.0
3,308,721	+				+1.4
3,308,721	+				+0.8
3,308,721	+				-0.0
3,308,722	-				-1.0
3,309,022	-		Rru_A2873	0.19	-0.0
3,309,069	+		Rru_A2873	0.23	-0.0
3,309,069	+		Rru_A2873	0.23	+0.9
3,309,070	-		Rru_A2873	0.23	-0.0
3,309,070	-		Rru_A2873	0.23	+1.5
3,309,070	-		Rru_A2873	0.23	-0.0
3,309,180	+		Rru_A2873	0.33	-0.0
3,309,180	+		Rru_A2873	0.33	+1.0
3,309,181	-		Rru_A2873	0.33	+0.9
3,309,181	-		Rru_A2873	0.33	+1.6
3,309,181	-		Rru_A2873	0.33	+0.9
3,309,199	-		Rru_A2873	0.34	-0.0
3,309,258	+		Rru_A2873	0.39	-0.0
3,309,259	-		Rru_A2873	0.39	-0.0
3,309,259	-		Rru_A2873	0.39	-0.0
3,309,273	+		Rru_A2873	0.41	-0.0
3,309,273	+		Rru_A2873	0.41	-0.0
3,309,273	+		Rru_A2873	0.41	+1.5
3,309,273	+		Rru_A2873	0.41	+1.7
3,309,273	+		Rru_A2873	0.41	+1.0
3,309,273	+		Rru_A2873	0.41	+0.6
3,309,273	+		Rru_A2873	0.41	+0.6
3,309,274	-		Rru_A2873	0.41	+1.1
3,309,543	+		Rru_A2873	0.63	-1.0
3,309,543	+		Rru_A2873	0.63	-0.0
3,309,543	+		Rru_A2873	0.63	+1.2
3,309,544	-		Rru_A2873	0.63	-0.0
3,309,544	-		Rru_A2873	0.63	+0.8
3,309,544	-		Rru_A2873	0.63	+1.7
3,309,594	+		Rru_A2873	0.68	-0.0
3,309,720	+		Rru_A2873	0.78	+1.2
3,309,720	+		Rru_A2873	0.78	-0.0
3,309,721	-		Rru_A2873	0.78	+1.0
3,309,810	+		Rru_A2873	0.86	+1.2
3,309,811	-		Rru_A2873	0.86	+1.3
3,309,811	-		Rru_A2873	0.86	+0.9
3,309,811	-		Rru_A2873	0.86	-0.0
3,309,811	-		Rru_A2873	0.86	+0.9
3,309,843	+		Rru_A2873	0.89	-0.0
3,309,843	+		Rru_A2873	0.89	+1.2
3,309,843	+		Rru_A2873	0.89	+2.1
3,309,844	-		Rru_A2873	0.89	+0.2
3,309,887	-				+1.3
3,309,991	+				+1.0
3,309,991	+				+0.9
3,309,991	+				-0.0
3,309,992	-				+1.4
3,309,992	-				+1.5
3,309,992	-				+1.2
3,309,992	-				-0.0
3,310,047	+				-0.0
3,310,047	+				+1.1
3,310,047	+				-1.0
3,310,048	-				+1.2
3,310,142	+				+0.7
3,310,143	-				-0.0
3,310,143	-				+1.4
3,310,154	+				-0.0
3,310,155	-				+0.7
3,310,171	+				-0.0
3,310,707	-		Rru_A2874	0.41	+1.6
3,310,809	-		Rru_A2874	0.48	-0.0
3,310,809	-		Rru_A2874	0.48	+1.6
3,310,811	-		Rru_A2874	0.49	-0.0
3,310,917	-		Rru_A2874	0.57	-0.0
3,310,917	-		Rru_A2874	0.57	+0.1