Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2859

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,291,138	+		Rru_A2858	0.23	-0.0
3,291,138	+		Rru_A2858	0.23	+0.4
3,291,219	-		Rru_A2858	0.33	-0.0
3,291,235	-		Rru_A2858	0.34	+1.2
3,291,407	+		Rru_A2858	0.54	+0.2
3,291,407	+		Rru_A2858	0.54	+0.5
3,291,407	+		Rru_A2858	0.54	+1.6
3,291,407	+		Rru_A2858	0.54	+0.8
3,291,408	-		Rru_A2858	0.54	+0.3
3,291,408	-		Rru_A2858	0.54	-1.0
3,291,408	-		Rru_A2858	0.54	+0.6
3,291,411	+		Rru_A2858	0.55	-0.0
3,291,412	-		Rru_A2858	0.55	-0.0
3,291,412	-		Rru_A2858	0.55	+0.5
3,291,412	-		Rru_A2858	0.55	+0.6
3,291,501	+		Rru_A2858	0.65	+1.0
3,291,502	-		Rru_A2858	0.65	+0.1
3,291,502	-		Rru_A2858	0.65	+0.9
3,291,640	-		Rru_A2858	0.81	+0.1
3,291,789	+				-0.0
3,291,789	+				-0.0
3,291,790	-				-0.4
3,291,790	-				+0.3
3,291,790	-				-0.0
3,291,790	-				-0.0
3,291,804	+				-0.0
3,291,804	+				-0.6
3,291,805	-				+0.0
3,291,807	+				-0.6
3,291,807	+				-0.0
3,291,807	+				-0.0
3,291,807	+				+0.5
3,291,807	+				-0.0
3,291,807	+				-0.0
3,291,808	-				+0.3
3,291,808	-				-1.0
3,291,808	-				-0.4
3,291,808	-				+0.7
3,291,808	-				+0.1
3,291,821	+				+0.6
3,291,822	-				+0.5
3,291,940	+				-0.0
3,291,940	+				+0.5
3,291,941	-				+1.1
3,291,941	-				-0.0
3,291,946	+				-1.0
3,291,946	+				+0.7
3,291,946	+				-0.0
3,291,947	-				-0.0
3,291,947	-				+0.7
3,291,995	+				+0.7
3,291,995	+				-0.0
3,291,995	+				-0.0
3,291,995	+				-0.0
3,291,996	-				+1.1
3,291,996	-				+1.6
3,291,997	+				-0.0
3,291,998	-				+1.2
3,291,998	-				+0.9
3,291,998	-				+1.1
3,291,998	-				-1.0
3,292,161	+				+0.5
3,292,161	+				+0.2
3,292,162	-				+1.3
3,292,162	-				+1.9
3,292,162	-				-0.4
3,293,037	-		Rru_A2859	0.40	+0.9
3,293,159	+		Rru_A2859	0.45	+1.2
3,293,160	-		Rru_A2859	0.45	+0.3
3,293,160	-		Rru_A2859	0.45	+1.2
3,293,168	+		Rru_A2859	0.46	+0.6
3,293,169	-		Rru_A2859	0.46	+0.7
3,293,217	+		Rru_A2859	0.48	-0.0
3,293,341	+		Rru_A2859	0.53	+1.1
3,293,341	+		Rru_A2859	0.53	+0.8
3,293,342	-		Rru_A2859	0.53	+0.7
3,293,540	+		Rru_A2859	0.62	+1.4
3,293,540	+		Rru_A2859	0.62	-0.0
3,293,567	-		Rru_A2859	0.63	+0.8
3,293,703	-		Rru_A2859	0.68	-0.0
3,293,703	-		Rru_A2859	0.68	+1.1
3,293,703	-		Rru_A2859	0.68	+0.6
3,293,703	-		Rru_A2859	0.68	+0.3
3,293,858	+		Rru_A2859	0.75	-0.0
3,293,858	+		Rru_A2859	0.75	+1.2
3,293,858	+		Rru_A2859	0.75	+1.1
3,293,859	-		Rru_A2859	0.75	+1.2
3,293,859	-		Rru_A2859	0.75	+0.7
3,294,050	+		Rru_A2859	0.83	+0.8
3,294,245	+				-0.0
3,294,245	+				+1.5
3,294,245	+				+0.9
3,294,245	+				-0.0
3,294,245	+				+1.7
3,294,246	-				+1.2
3,294,246	-				-0.0
3,294,246	-				-0.0
3,294,246	-				-0.0
3,294,246	-				-0.0
3,294,246	-				+0.8
3,294,460	+				-0.0
3,294,460	+				+1.2
3,294,460	+				-0.0
3,294,557	+		Rru_A2860	0.12	+0.6
3,294,557	+		Rru_A2860	0.12	-0.0
3,294,557	+		Rru_A2860	0.12	-0.0
3,294,557	+		Rru_A2860	0.12	-0.0
3,294,558	-		Rru_A2860	0.12	-0.0
3,294,623	-		Rru_A2860	0.22	+0.9
3,294,679	-		Rru_A2860	0.31	-0.0
3,295,039	+		Rru_A2860	0.87	+0.8
3,295,039	+		Rru_A2860	0.87	+0.9
3,295,040	-		Rru_A2860	0.87	+1.0