Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2856

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,288,966	+		Rru_A2855	0.68	+1.0
3,289,127	+		Rru_A2855	0.74	+0.6
3,289,127	+		Rru_A2855	0.74	-0.0
3,289,127	+		Rru_A2855	0.74	-0.0
3,289,127	+		Rru_A2855	0.74	+0.7
3,289,127	+		Rru_A2855	0.74	-0.0
3,289,128	-		Rru_A2855	0.74	-0.0
3,289,128	-		Rru_A2855	0.74	-0.0
3,289,128	-		Rru_A2855	0.74	+0.5
3,290,063	+		Rru_A2856	0.47	+1.7
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	-0.0
3,290,063	+		Rru_A2856	0.47	+0.7
3,290,064	-		Rru_A2856	0.48	+0.7
3,290,064	-		Rru_A2856	0.48	-0.0
3,290,064	-		Rru_A2856	0.48	+0.9
3,290,172	-		Rru_A2856	0.82	+0.9
3,290,172	-		Rru_A2856	0.82	-0.0
3,290,172	-		Rru_A2856	0.82	-0.0
3,290,172	-		Rru_A2856	0.82	+0.5
3,290,172	-		Rru_A2856	0.82	+0.4
3,290,216	+				+0.7
3,290,217	-				-0.0
3,290,217	-				+0.2
3,290,217	-				+1.0
3,290,219	+				+0.2
3,290,220	-				+0.0
3,290,220	-				-0.0
3,290,220	-				+0.3
3,290,220	-				+1.4
3,290,220	-				+1.7
3,290,275	+				-0.2
3,290,275	+				+0.1
3,290,322	-		Rru_A2857	0.19	+0.3
3,290,322	-		Rru_A2857	0.19	+0.6
3,290,322	-		Rru_A2857	0.19	+1.2
3,290,322	-		Rru_A2857	0.19	+0.5
3,290,346	+		Rru_A2857	0.24	-1.2
3,290,397	+		Rru_A2857	0.35	-2.7
3,290,397	+		Rru_A2857	0.35	+0.3
3,290,397	+		Rru_A2857	0.35	-0.0
3,290,397	+		Rru_A2857	0.35	-0.0
3,290,433	+		Rru_A2857	0.43	-0.0
3,290,495	+		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	+1.6
3,290,496	-		Rru_A2857	0.57	-0.0
3,290,496	-		Rru_A2857	0.57	-1.1
3,290,496	-		Rru_A2857	0.57	-1.9
3,290,676	+				-0.0
3,290,715	+				+0.9
3,290,784	+				-0.0
3,290,784	+				+0.3
3,290,822	+				+1.3
3,290,822	+				+0.7
3,290,855	+				+0.8
3,290,855	+				+0.2
3,290,855	+				-2.0
3,290,855	+				+0.7
3,290,855	+				+0.9
3,290,855	+				+0.7
3,290,855	+				+0.7
3,290,856	-				-1.7
3,290,856	-				+0.8
3,290,856	-				+0.9
3,290,936	+				+0.1
3,291,138	+		Rru_A2858	0.23	-0.0
3,291,138	+		Rru_A2858	0.23	+0.4
3,291,219	-		Rru_A2858	0.33	-0.0