Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2838

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,269,032	+				+1.2
3,269,032	+				+1.3
3,269,243	-				-0.0
3,269,339	-				-0.0
3,269,628	-		Rru_A2837	0.75	+0.2
3,269,667	-		Rru_A2837	0.85	+0.9
3,269,682	-		Rru_A2837	0.88	-0.0
3,269,709	-				+0.3
3,269,790	+				+1.7
3,269,835	+				-1.0
3,269,835	+				-1.6
3,269,836	-				-0.0
3,269,836	-				+1.0
3,269,839	+				+1.0
3,269,840	-				-0.0
3,269,854	+				+0.6
3,269,854	+				-0.0
3,269,854	+				+1.2
3,269,854	+				+1.0
3,269,854	+				+1.2
3,269,855	-				-0.0
3,269,856	+				-0.0
3,269,856	+				+0.8
3,269,856	+				-0.0
3,269,857	-				-0.3
3,269,969	-		Rru_A2838	0.10	+1.8
3,270,052	+		Rru_A2838	0.22	+1.3
3,270,094	+		Rru_A2838	0.28	-0.0
3,270,095	-		Rru_A2838	0.28	-0.0
3,270,095	-		Rru_A2838	0.28	-0.0
3,270,096	+		Rru_A2838	0.28	+0.9
3,270,097	-		Rru_A2838	0.28	-0.0
3,270,097	-		Rru_A2838	0.28	-0.0
3,270,100	+		Rru_A2838	0.29	-0.0
3,270,140	-		Rru_A2838	0.34	+0.5
3,270,140	-		Rru_A2838	0.34	-0.0
3,270,140	-		Rru_A2838	0.34	+1.1
3,270,185	-		Rru_A2838	0.41	+0.5
3,270,610	+				+1.3
3,270,611	-				-0.0
3,270,611	-				+0.8
3,270,611	-				+1.3
3,270,611	-				-0.0
3,270,611	-				-0.0
3,270,611	-				-1.0
3,270,611	-				-0.0
3,270,923	+		Rru_A2839	0.39	+1.2
3,271,114	+		Rru_A2839	0.64	-0.0
3,271,114	+		Rru_A2839	0.64	-0.0
3,271,115	-		Rru_A2839	0.65	+1.4
3,271,115	-		Rru_A2839	0.65	-1.0
3,271,116	+		Rru_A2839	0.65	+1.5
3,271,116	+		Rru_A2839	0.65	+1.2
3,271,116	+		Rru_A2839	0.65	+2.6
3,271,116	+		Rru_A2839	0.65	-0.0
3,271,116	+		Rru_A2839	0.65	+1.7
3,271,117	-		Rru_A2839	0.65	+0.7
3,271,117	-		Rru_A2839	0.65	-0.0
3,271,273	+		Rru_A2839	0.86	+0.9
3,271,273	+		Rru_A2839	0.86	+0.7
3,271,395	+				-0.0
3,271,559	+		Rru_A2840	0.16	+1.9
3,271,559	+		Rru_A2840	0.16	+0.9
3,271,559	+		Rru_A2840	0.16	-0.0
3,271,560	-		Rru_A2840	0.16	+1.3
3,271,560	-		Rru_A2840	0.16	-0.0
3,271,560	-		Rru_A2840	0.16	-0.0
3,271,560	-		Rru_A2840	0.16	+1.6