Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2817
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
3,248,034 | + | Rru_A2816 | 0.20 | +0.7 | |
3,248,409 | - | Rru_A2816 | 0.85 | -0.0 | |
3,248,493 | + | -0.0 | |||
3,248,518 | + | -0.0 | |||
3,248,668 | - | -0.0 | |||
3,248,888 | + | Rru_A2817 | 0.69 | -0.0 | |
3,248,888 | + | Rru_A2817 | 0.69 | +0.9 | |
3,248,961 | + | Rru_A2817 | 0.89 | +0.5 | |
3,248,962 | - | Rru_A2817 | 0.90 | +0.6 | |
3,249,030 | - | +0.2 | |||
3,249,030 | - | +1.1 | |||
3,249,095 | + | -0.0 | |||
3,249,095 | + | -0.0 | |||
3,249,096 | - | +0.7 | |||
3,249,096 | - | -0.0 | |||
3,249,100 | + | -0.0 | |||
3,249,100 | + | -0.0 | |||
3,249,100 | + | -0.0 | |||
3,249,101 | - | +0.9 | |||
3,249,101 | - | +0.9 |
Or see this region's nucleotide sequence