Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2789

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,222,498	+		Rru_A2788	0.25	+1.4
3,222,498	+		Rru_A2788	0.25	-0.0
3,222,498	+		Rru_A2788	0.25	+0.9
3,222,551	+		Rru_A2788	0.29	+0.7
3,222,551	+		Rru_A2788	0.29	+1.2
3,222,552	-		Rru_A2788	0.29	+0.6
3,222,815	+		Rru_A2788	0.49	+0.8
3,222,816	-		Rru_A2788	0.49	-1.0
3,222,816	-		Rru_A2788	0.49	-0.0
3,222,945	+		Rru_A2788	0.59	-0.0
3,222,945	+		Rru_A2788	0.59	+1.2
3,222,945	+		Rru_A2788	0.59	-0.0
3,222,945	+		Rru_A2788	0.59	+0.4
3,222,946	-		Rru_A2788	0.59	+1.6
3,222,946	-		Rru_A2788	0.59	-0.0
3,222,946	-		Rru_A2788	0.59	-0.4
3,222,946	-		Rru_A2788	0.59	+1.3
3,222,946	-		Rru_A2788	0.59	-0.0
3,222,946	-		Rru_A2788	0.59	+1.2
3,222,946	-		Rru_A2788	0.59	+0.9
3,222,946	-		Rru_A2788	0.59	+0.6
3,222,946	-		Rru_A2788	0.59	-0.0
3,222,946	-		Rru_A2788	0.59	-0.0
3,222,948	+		Rru_A2788	0.59	+1.1
3,222,948	+		Rru_A2788	0.59	-0.0
3,222,949	-		Rru_A2788	0.59	-0.0
3,222,949	-		Rru_A2788	0.59	+0.7
3,222,949	-		Rru_A2788	0.59	+0.8
3,222,949	-		Rru_A2788	0.59	+0.4
3,222,949	-		Rru_A2788	0.59	-0.0
3,223,137	+		Rru_A2788	0.73	+1.1
3,223,137	+		Rru_A2788	0.73	+1.2
3,223,275	+		Rru_A2788	0.83	-0.1
3,223,491	+				+1.1
3,223,491	+				-0.0
3,223,491	+				+1.4
3,223,871	+		Rru_A2789	0.25	-0.0
3,223,872	-		Rru_A2789	0.25	+1.5
3,224,098	+		Rru_A2789	0.38	+0.8
3,224,098	+		Rru_A2789	0.38	-0.0
3,224,098	+		Rru_A2789	0.38	+0.5
3,224,099	-		Rru_A2789	0.38	-0.0
3,224,099	-		Rru_A2789	0.38	+2.2
3,224,135	+		Rru_A2789	0.40	+1.0
3,224,136	-		Rru_A2789	0.40	-0.0
3,224,136	-		Rru_A2789	0.40	-0.0
3,224,136	-		Rru_A2789	0.40	+0.9
3,224,194	+		Rru_A2789	0.44	+2.0
3,224,194	+		Rru_A2789	0.44	+0.8
3,224,204	+		Rru_A2789	0.44	-0.0
3,224,204	+		Rru_A2789	0.44	-0.0
3,224,204	+		Rru_A2789	0.44	-0.0
3,224,470	+		Rru_A2789	0.60	-0.0
3,224,470	+		Rru_A2789	0.60	+1.5
3,224,470	+		Rru_A2789	0.60	+1.7
3,224,470	+		Rru_A2789	0.60	-0.0
3,224,471	-		Rru_A2789	0.60	-1.0
3,224,471	-		Rru_A2789	0.60	+0.9
3,224,471	-		Rru_A2789	0.60	+0.4
3,224,471	-		Rru_A2789	0.60	+1.3
3,224,471	-		Rru_A2789	0.60	+1.2
3,224,471	-		Rru_A2789	0.60	+1.3
3,224,471	-		Rru_A2789	0.60	-0.0
3,224,473	+		Rru_A2789	0.60	+1.4
3,224,473	+		Rru_A2789	0.60	+1.2
3,224,474	-		Rru_A2789	0.60	-1.4
3,224,474	-		Rru_A2789	0.60	-0.0
3,224,476	+		Rru_A2789	0.60	+2.7
3,224,476	+		Rru_A2789	0.60	-0.0
3,224,713	+		Rru_A2789	0.74	-0.0
3,224,714	-		Rru_A2789	0.74	+1.4
3,224,714	-		Rru_A2789	0.74	-1.0
3,224,875	-		Rru_A2789	0.84	+1.2
3,224,892	+		Rru_A2789	0.85	-2.0
3,224,892	+		Rru_A2789	0.85	+0.8
3,224,892	+		Rru_A2789	0.85	+1.6
3,224,892	+		Rru_A2789	0.85	+0.9
3,224,893	-		Rru_A2789	0.85	-0.0
3,224,893	-		Rru_A2789	0.85	+1.4
3,224,893	-		Rru_A2789	0.85	-0.0
3,224,893	-		Rru_A2789	0.85	-0.0
3,224,893	-		Rru_A2789	0.85	+1.7
3,224,965	+		Rru_A2789	0.89	+1.9
3,224,965	+		Rru_A2789	0.89	+2.0
3,224,965	+		Rru_A2789	0.89	+0.4
3,224,965	+		Rru_A2789	0.89	+1.2
3,224,965	+		Rru_A2789	0.89	-0.0
3,224,966	-		Rru_A2789	0.89	+1.2
3,225,207	+				+1.7
3,225,231	+				-0.0
3,225,232	-				+0.6
3,225,260	+				+0.8
3,225,260	+				+1.4
3,225,261	-				-0.0
3,225,261	-				+1.6
3,225,261	-				-0.0
3,225,394	+		Rru_A2790	0.17	+1.0
3,225,394	+		Rru_A2790	0.17	+0.4
3,225,395	-		Rru_A2790	0.17	-0.0
3,225,395	-		Rru_A2790	0.17	-0.0
3,225,395	-		Rru_A2790	0.17	+1.0
3,225,395	-		Rru_A2790	0.17	-1.0
3,225,462	+		Rru_A2790	0.30	-1.0
3,225,484	-		Rru_A2790	0.34	+0.9
3,225,778	-				+1.3
3,225,819	+				+0.4
3,225,819	+				+1.1
3,225,819	+				+0.8
3,225,820	-				-0.0
3,225,854	+				+0.2