Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2784

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,216,687	+				-0.0
3,216,703	+				+1.1
3,216,703	+				+1.4
3,216,703	+				-0.0
3,216,704	-				+1.2
3,216,704	-				+1.0
3,216,704	-				+1.4
3,216,704	-				-1.0
3,216,770	+				+1.5
3,216,906	+		Rru_A2783	0.24	+1.1
3,216,906	+		Rru_A2783	0.24	-0.0
3,216,906	+		Rru_A2783	0.24	-0.0
3,216,909	+		Rru_A2783	0.25	-0.8
3,216,909	+		Rru_A2783	0.25	-0.0
3,216,909	+		Rru_A2783	0.25	-0.0
3,216,909	+		Rru_A2783	0.25	+1.5
3,216,909	+		Rru_A2783	0.25	+0.6
3,216,910	-		Rru_A2783	0.25	+0.5
3,216,910	-		Rru_A2783	0.25	+1.3
3,216,910	-		Rru_A2783	0.25	+2.1
3,216,910	-		Rru_A2783	0.25	-1.0
3,216,910	-		Rru_A2783	0.25	+1.1
3,216,910	-		Rru_A2783	0.25	+1.1
3,216,910	-		Rru_A2783	0.25	-0.4
3,216,910	-		Rru_A2783	0.25	+0.7
3,216,910	-		Rru_A2783	0.25	-0.0
3,216,910	-		Rru_A2783	0.25	-1.0
3,217,089	+		Rru_A2783	0.57	-0.2
3,217,090	-		Rru_A2783	0.57	-0.3
3,217,090	-		Rru_A2783	0.57	+0.7
3,217,281	+				-1.0
3,217,281	+				-0.0
3,217,282	-				+1.1
3,217,282	-				-1.0
3,217,282	-				+1.0
3,217,329	+				-0.0
3,217,329	+				-0.0
3,217,329	+				+2.0
3,217,329	+				+0.9
3,217,467	-				-1.0
3,217,553	+				-1.6
3,217,562	-				-1.0
3,217,583	+				+1.1
3,217,583	+				+0.6
3,217,583	+				+1.2
3,217,583	+				-0.0
3,217,583	+				+1.2
3,217,584	-				-0.0
3,217,584	-				-0.0
3,217,584	-				-0.0
3,217,707	+		Rru_A2784	0.10	+1.4
3,217,707	+		Rru_A2784	0.10	-0.0
3,217,707	+		Rru_A2784	0.10	+0.9
3,217,708	-		Rru_A2784	0.10	+1.1
3,217,708	-		Rru_A2784	0.10	+1.2
3,217,709	+		Rru_A2784	0.11	+1.2
3,217,710	-		Rru_A2784	0.11	-0.0
3,217,789	-		Rru_A2784	0.19	+1.1
3,217,789	-		Rru_A2784	0.19	+1.1
3,217,842	+		Rru_A2784	0.24	-0.0
3,217,843	-		Rru_A2784	0.24	+1.7
3,217,992	+		Rru_A2784	0.39	-1.0
3,217,992	+		Rru_A2784	0.39	-1.0
3,217,992	+		Rru_A2784	0.39	+2.3
3,217,992	+		Rru_A2784	0.39	+0.7
3,217,992	+		Rru_A2784	0.39	-0.0
3,217,992	+		Rru_A2784	0.39	+1.3
3,217,992	+		Rru_A2784	0.39	+1.0
3,217,992	+		Rru_A2784	0.39	+0.9
3,217,992	+		Rru_A2784	0.39	+1.0
3,217,992	+		Rru_A2784	0.39	-0.0
3,217,992	+		Rru_A2784	0.39	+1.2
3,217,992	+		Rru_A2784	0.39	-0.0
3,217,993	-		Rru_A2784	0.39	+1.1
3,217,993	-		Rru_A2784	0.39	+1.1
3,217,993	-		Rru_A2784	0.39	+1.1
3,217,993	-		Rru_A2784	0.39	+1.2
3,217,993	-		Rru_A2784	0.39	+1.2
3,218,010	+		Rru_A2784	0.41	+0.6
3,218,010	+		Rru_A2784	0.41	-0.0
3,218,010	+		Rru_A2784	0.41	+1.3
3,218,010	+		Rru_A2784	0.41	-0.0
3,218,011	-		Rru_A2784	0.41	+2.1
3,218,011	-		Rru_A2784	0.41	-0.0
3,218,011	-		Rru_A2784	0.41	+1.2
3,218,238	+		Rru_A2784	0.64	+0.9
3,218,421	+		Rru_A2784	0.82	-0.0
3,218,422	-		Rru_A2784	0.83	-0.0
3,218,422	-		Rru_A2784	0.83	-0.0
3,218,430	+		Rru_A2784	0.83	-1.0
3,218,436	+		Rru_A2784	0.84	-0.0
3,218,436	+		Rru_A2784	0.84	+0.9
3,218,436	+		Rru_A2784	0.84	+1.8
3,218,437	-		Rru_A2784	0.84	+2.4
3,218,437	-		Rru_A2784	0.84	+0.9
3,218,437	-		Rru_A2784	0.84	-0.0
3,218,592	+				+1.0
3,218,592	+				-2.0
3,218,592	+				+0.9
3,218,593	-				-0.0
3,218,593	-				+1.1
3,218,788	+				+0.3
3,218,789	-				-0.4
3,218,804	+		Rru_A2785	0.11	+1.0
3,218,804	+		Rru_A2785	0.11	+1.3
3,218,804	+		Rru_A2785	0.11	+1.0
3,218,805	-		Rru_A2785	0.11	-0.0
3,219,238	+		Rru_A2785	0.39	-0.0
3,219,238	+		Rru_A2785	0.39	-1.0
3,219,238	+		Rru_A2785	0.39	+0.8
3,219,244	-		Rru_A2785	0.40	-1.6