Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2742

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	+0.9
3,173,425	+		Rru_A2741	0.32	+0.2
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	+1.4
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	+1.0
3,173,426	-		Rru_A2741	0.32	+1.1
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,426	-		Rru_A2741	0.32	+1.5
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,426	-		Rru_A2741	0.32	+1.3
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,426	-		Rru_A2741	0.32	+0.7
3,173,426	-		Rru_A2741	0.32	+0.9
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,599	+		Rru_A2741	0.49	-0.6
3,173,599	+		Rru_A2741	0.49	+0.9
3,173,771	+		Rru_A2741	0.65	+1.0
3,173,771	+		Rru_A2741	0.65	+0.8
3,173,772	-		Rru_A2741	0.65	+1.0
3,173,772	-		Rru_A2741	0.65	+1.2
3,173,772	-		Rru_A2741	0.65	-0.0
3,173,809	+		Rru_A2741	0.68	+1.2
3,173,819	-		Rru_A2741	0.69	-0.0
3,173,819	-		Rru_A2741	0.69	-0.0
3,173,950	+		Rru_A2741	0.82	+1.4
3,173,951	-		Rru_A2741	0.82	-0.0
3,173,992	+		Rru_A2741	0.85	+1.3
3,173,992	+		Rru_A2741	0.85	-0.0
3,173,992	+		Rru_A2741	0.85	-0.0
3,173,992	+		Rru_A2741	0.85	+1.2
3,173,993	-		Rru_A2741	0.86	-0.0
3,173,993	-		Rru_A2741	0.86	+1.1
3,173,993	-		Rru_A2741	0.86	+1.4
3,173,993	-		Rru_A2741	0.86	-0.4
3,173,993	-		Rru_A2741	0.86	+1.4
3,173,993	-		Rru_A2741	0.86	-0.0
3,174,018	-		Rru_A2741	0.88	-1.6
3,174,123	+				-0.0
3,174,123	+				+0.7
3,174,124	-				+2.3
3,174,124	-				+1.1
3,174,124	-				-0.0
3,174,152	+				+1.7
3,174,169	-				-0.0
3,174,218	+				-0.0
3,174,219	-				+0.6
3,174,223	-				+1.4
3,174,223	-				-0.0
3,174,223	-				-0.0
3,174,246	-				-1.6
3,174,303	+				-0.0
3,174,303	+				+1.9
3,174,303	+				+0.5
3,174,303	+				+1.2
3,174,303	+				+0.7
3,174,304	-				-0.0
3,174,524	-		Rru_A2742	0.16	-0.0
3,174,652	+		Rru_A2742	0.24	+1.1
3,174,652	+		Rru_A2742	0.24	+1.0
3,174,653	-		Rru_A2742	0.24	-0.0
3,174,791	-		Rru_A2742	0.33	-0.0
3,175,057	+		Rru_A2742	0.50	-0.0
3,175,057	+		Rru_A2742	0.50	+0.8
3,175,057	+		Rru_A2742	0.50	+2.0
3,175,057	+		Rru_A2742	0.50	-0.0
3,175,057	+		Rru_A2742	0.50	+2.5
3,175,058	-		Rru_A2742	0.50	+1.0
3,175,058	-		Rru_A2742	0.50	-0.0
3,175,360	+		Rru_A2742	0.70	+1.4
3,175,360	+		Rru_A2742	0.70	+1.6
3,175,360	+		Rru_A2742	0.70	+2.2
3,175,360	+		Rru_A2742	0.70	+0.7
3,175,360	+		Rru_A2742	0.70	-0.0
3,175,361	-		Rru_A2742	0.70	+1.4
3,175,361	-		Rru_A2742	0.70	+1.1
3,175,361	-		Rru_A2742	0.70	+0.9
3,175,361	-		Rru_A2742	0.70	-0.0
3,175,361	-		Rru_A2742	0.70	+1.0
3,175,522	+		Rru_A2742	0.80	+0.9
3,175,522	+		Rru_A2742	0.80	+0.9
3,175,523	-		Rru_A2742	0.81	-0.0
3,175,523	-		Rru_A2742	0.81	-1.6
3,175,523	-		Rru_A2742	0.81	+0.3
3,175,740	-				+0.8
3,175,828	+				+3.2
3,175,828	+				+0.7
3,175,829	-				+0.7
3,175,829	-				+0.4
3,175,864	+				-0.0
3,175,864	+				-0.0
3,175,864	+				-0.0
3,175,865	-				+1.4
3,175,865	-				-0.0
3,175,936	+		Rru_A2743	0.11	+0.8
3,175,937	-		Rru_A2743	0.11	+1.6
3,176,061	+		Rru_A2743	0.23	+1.2
3,176,062	-		Rru_A2743	0.23	-0.0
3,176,078	+		Rru_A2743	0.25	-0.0
3,176,078	+		Rru_A2743	0.25	+1.2
3,176,079	-		Rru_A2743	0.25	+0.9
3,176,101	+		Rru_A2743	0.27	+0.7
3,176,101	+		Rru_A2743	0.27	+1.3
3,176,102	-		Rru_A2743	0.27	+1.0
3,176,102	-		Rru_A2743	0.27	-0.0
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,200	+		Rru_A2743	0.37	+0.9
3,176,200	+		Rru_A2743	0.37	-0.4
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,200	+		Rru_A2743	0.37	-0.0
3,176,201	-		Rru_A2743	0.37	+1.3
3,176,201	-		Rru_A2743	0.37	+1.2
3,176,201	-		Rru_A2743	0.37	+1.2
3,176,408	+		Rru_A2743	0.58	+1.5
3,176,408	+		Rru_A2743	0.58	-0.0
3,176,408	+		Rru_A2743	0.58	+1.6
3,176,408	+		Rru_A2743	0.58	+0.7
3,176,408	+		Rru_A2743	0.58	-1.6
3,176,409	-		Rru_A2743	0.58	+1.4
3,176,409	-		Rru_A2743	0.58	+1.0
3,176,409	-		Rru_A2743	0.58	-1.0
3,176,570	+		Rru_A2743	0.74	+1.2
3,176,573	-		Rru_A2743	0.74	-0.1
3,176,573	-		Rru_A2743	0.74	+1.2
3,176,581	+		Rru_A2743	0.75	+1.1
3,176,582	-		Rru_A2743	0.75	+0.9
3,176,582	-		Rru_A2743	0.75	+1.0
3,176,582	-		Rru_A2743	0.75	+1.2
3,176,651	+		Rru_A2743	0.82	+0.8
3,176,651	+		Rru_A2743	0.82	+0.8
3,176,651	+		Rru_A2743	0.82	+1.3
3,176,651	+		Rru_A2743	0.82	-1.0
3,176,651	+		Rru_A2743	0.82	-0.0
3,176,651	+		Rru_A2743	0.82	-1.0
3,176,652	-		Rru_A2743	0.82	+1.6
3,176,652	-		Rru_A2743	0.82	+1.0
3,176,652	-		Rru_A2743	0.82	+1.4
3,176,652	-		Rru_A2743	0.82	+1.8
3,176,652	-		Rru_A2743	0.82	-0.0
3,176,782	+				-0.0
3,176,783	-				-0.0
3,176,823	+				+1.6
3,176,823	+				+0.8