Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2740

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,171,011	-		Rru_A2739	0.60	-0.0
3,171,012	+		Rru_A2739	0.60	-0.0
3,171,012	+		Rru_A2739	0.60	+2.6
3,171,012	+		Rru_A2739	0.60	-0.0
3,171,012	+		Rru_A2739	0.60	-0.0
3,171,012	+		Rru_A2739	0.60	+0.9
3,171,013	-		Rru_A2739	0.60	+0.9
3,171,155	+		Rru_A2739	0.66	-0.0
3,171,155	+		Rru_A2739	0.66	-1.0
3,171,155	+		Rru_A2739	0.66	-1.0
3,171,155	+		Rru_A2739	0.66	-2.4
3,171,155	+		Rru_A2739	0.66	+0.8
3,171,156	-		Rru_A2739	0.66	+1.3
3,171,156	-		Rru_A2739	0.66	+0.7
3,171,156	-		Rru_A2739	0.66	-0.0
3,171,156	-		Rru_A2739	0.66	+1.9
3,171,156	-		Rru_A2739	0.66	+2.8
3,171,156	-		Rru_A2739	0.66	-0.0
3,171,198	-		Rru_A2739	0.68	-0.0
3,171,216	+		Rru_A2739	0.69	-0.0
3,171,216	+		Rru_A2739	0.69	+0.7
3,171,217	-		Rru_A2739	0.69	+1.0
3,171,261	+		Rru_A2739	0.70	-0.0
3,171,262	-		Rru_A2739	0.70	+1.3
3,171,262	-		Rru_A2739	0.70	+0.6
3,171,262	-		Rru_A2739	0.70	+1.3
3,171,262	-		Rru_A2739	0.70	+1.0
3,171,262	-		Rru_A2739	0.70	+0.6
3,171,265	-		Rru_A2739	0.71	-0.0
3,171,265	-		Rru_A2739	0.71	-1.6
3,171,265	-		Rru_A2739	0.71	+1.2
3,171,265	-		Rru_A2739	0.71	+1.1
3,171,265	-		Rru_A2739	0.71	+1.0
3,171,265	-		Rru_A2739	0.71	-0.0
3,171,465	+		Rru_A2739	0.79	+1.5
3,171,466	-		Rru_A2739	0.79	-0.0
3,171,466	-		Rru_A2739	0.79	+1.7
3,171,625	+		Rru_A2739	0.85	-0.0
3,171,626	-		Rru_A2739	0.85	+0.7
3,171,654	+		Rru_A2739	0.86	+1.6
3,171,654	+		Rru_A2739	0.86	+1.6
3,171,654	+		Rru_A2739	0.86	-1.0
3,171,655	-		Rru_A2739	0.86	+1.0
3,171,655	-		Rru_A2739	0.86	-0.0
3,171,697	+		Rru_A2739	0.88	+1.5
3,171,897	+				+1.0
3,171,898	-				-0.0
3,171,898	-				-0.0
3,172,053	+				+2.1
3,172,053	+				-0.0
3,172,054	-				-0.0
3,172,055	+				-0.0
3,172,055	+				-0.0
3,172,055	+				+1.8
3,172,056	-				-0.0
3,172,056	-				+2.1
3,172,056	-				+1.7
3,172,056	-				+1.6
3,172,056	-				+1.6
3,172,143	+		Rru_A2740	0.14	+1.7
3,172,143	+		Rru_A2740	0.14	+1.5
3,172,144	-		Rru_A2740	0.14	+1.3
3,172,144	-		Rru_A2740	0.14	-0.0
3,172,144	-		Rru_A2740	0.14	-0.0
3,172,144	-		Rru_A2740	0.14	+1.8
3,172,444	+		Rru_A2740	0.42	-0.0
3,172,445	-		Rru_A2740	0.42	+1.3
3,172,445	-		Rru_A2740	0.42	+2.2
3,172,445	-		Rru_A2740	0.42	+1.9
3,172,650	+		Rru_A2740	0.61	+1.7
3,172,651	-		Rru_A2740	0.61	+1.8
3,172,652	+		Rru_A2740	0.61	+1.5
3,172,652	+		Rru_A2740	0.61	+1.9
3,172,652	+		Rru_A2740	0.61	+1.8
3,172,744	-		Rru_A2740	0.69	+1.7
3,172,778	+		Rru_A2740	0.72	+2.4
3,172,778	+		Rru_A2740	0.72	-0.0
3,172,778	+		Rru_A2740	0.72	+1.1
3,172,779	-		Rru_A2740	0.72	+1.6
3,172,985	+				+0.2
3,172,986	-				-1.0
3,172,986	-				-0.0
3,173,191	+		Rru_A2741	0.10	+0.5
3,173,191	+		Rru_A2741	0.10	-0.0
3,173,192	-		Rru_A2741	0.11	+1.4
3,173,192	-		Rru_A2741	0.11	-0.0
3,173,192	-		Rru_A2741	0.11	-0.0
3,173,192	-		Rru_A2741	0.11	+1.2
3,173,192	-		Rru_A2741	0.11	-0.0
3,173,192	-		Rru_A2741	0.11	+0.1
3,173,260	+		Rru_A2741	0.17	+1.0
3,173,260	+		Rru_A2741	0.17	+0.2
3,173,261	-		Rru_A2741	0.17	+0.7
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	+0.9
3,173,425	+		Rru_A2741	0.32	+0.2
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	+1.4
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	-0.0
3,173,425	+		Rru_A2741	0.32	+1.0
3,173,426	-		Rru_A2741	0.32	+1.1
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,426	-		Rru_A2741	0.32	+1.5
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,426	-		Rru_A2741	0.32	+1.3
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,426	-		Rru_A2741	0.32	+0.7
3,173,426	-		Rru_A2741	0.32	+0.9
3,173,426	-		Rru_A2741	0.32	-0.0
3,173,599	+		Rru_A2741	0.49	-0.6
3,173,599	+		Rru_A2741	0.49	+0.9
3,173,771	+		Rru_A2741	0.65	+1.0
3,173,771	+		Rru_A2741	0.65	+0.8
3,173,772	-		Rru_A2741	0.65	+1.0
3,173,772	-		Rru_A2741	0.65	+1.2
3,173,772	-		Rru_A2741	0.65	-0.0
3,173,809	+		Rru_A2741	0.68	+1.2
3,173,819	-		Rru_A2741	0.69	-0.0
3,173,819	-		Rru_A2741	0.69	-0.0
3,173,950	+		Rru_A2741	0.82	+1.4
3,173,951	-		Rru_A2741	0.82	-0.0
3,173,992	+		Rru_A2741	0.85	+1.3
3,173,992	+		Rru_A2741	0.85	-0.0
3,173,992	+		Rru_A2741	0.85	-0.0
3,173,992	+		Rru_A2741	0.85	+1.2
3,173,993	-		Rru_A2741	0.86	-0.0
3,173,993	-		Rru_A2741	0.86	+1.1
3,173,993	-		Rru_A2741	0.86	+1.4
3,173,993	-		Rru_A2741	0.86	-0.4
3,173,993	-		Rru_A2741	0.86	+1.4
3,173,993	-		Rru_A2741	0.86	-0.0
3,174,018	-		Rru_A2741	0.88	-1.6