Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2598

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
3,018,644	+				+0.7
3,018,645	-				+2.1
3,018,699	+				+1.5
3,018,700	-				+1.8
3,019,277	-		Rru_A2597	0.74	-0.0
3,019,302	+		Rru_A2597	0.77	-0.0
3,019,302	+		Rru_A2597	0.77	+0.8
3,019,303	-		Rru_A2597	0.77	-0.0
3,019,309	+		Rru_A2597	0.78	+0.9
3,019,310	-		Rru_A2597	0.78	+1.3
3,019,369	-		Rru_A2597	0.85	+1.0
3,019,404	+		Rru_A2597	0.89	+1.8
3,019,556	+				-0.0
3,019,556	+				-0.4
3,019,556	+				+2.5
3,019,556	+				-0.1
3,019,557	-				-0.0
3,019,557	-				-0.0
3,019,557	-				+0.4
3,019,557	-				+0.7
3,019,607	+				+1.0
3,019,607	+				-0.0
3,019,607	+				-0.0
3,019,608	-				-0.0
3,019,608	-				-1.0
3,019,608	-				+1.3
3,019,608	-				-0.0
3,019,608	-				+1.1
3,019,608	-				-0.0
3,019,610	+				+2.4
3,019,610	+				+0.5
3,019,610	+				-0.0
3,019,611	-				-0.0
3,019,611	-				-0.0
3,019,611	-				-0.0
3,019,693	+		Rru_A2598	0.16	+1.8
3,019,693	+		Rru_A2598	0.16	+1.7
3,019,693	+		Rru_A2598	0.16	+0.5
3,019,694	-		Rru_A2598	0.16	+0.9
3,019,694	-		Rru_A2598	0.16	+0.5
3,019,694	-		Rru_A2598	0.16	+2.5
3,019,694	-		Rru_A2598	0.16	-0.0
3,019,694	-		Rru_A2598	0.16	-0.0
3,019,695	+		Rru_A2598	0.16	-0.0
3,019,695	+		Rru_A2598	0.16	-0.0
3,019,695	+		Rru_A2598	0.16	+1.5
3,019,695	+		Rru_A2598	0.16	+0.7
3,019,695	+		Rru_A2598	0.16	+1.4
3,019,695	+		Rru_A2598	0.16	+2.3
3,019,696	-		Rru_A2598	0.16	-0.0
3,019,696	-		Rru_A2598	0.16	-0.5
3,019,696	-		Rru_A2598	0.16	-1.0
3,019,696	-		Rru_A2598	0.16	-0.0
3,019,696	-		Rru_A2598	0.16	+1.2
3,019,696	-		Rru_A2598	0.16	+1.7
3,019,853	+		Rru_A2598	0.30	-0.0
3,019,853	+		Rru_A2598	0.30	+1.2
3,019,854	-		Rru_A2598	0.30	-0.0
3,019,860	+		Rru_A2598	0.30	+2.0
3,019,861	-		Rru_A2598	0.30	-0.0
3,019,861	-		Rru_A2598	0.30	-0.0
3,019,976	+		Rru_A2598	0.40	-0.0
3,019,976	+		Rru_A2598	0.40	+2.2
3,019,977	-		Rru_A2598	0.40	-0.0
3,020,078	+		Rru_A2598	0.48	+1.4
3,020,079	-		Rru_A2598	0.49	+1.0
3,020,079	-		Rru_A2598	0.49	+2.3
3,020,169	-		Rru_A2598	0.56	+0.9
3,020,230	-		Rru_A2598	0.61	-0.0
3,020,230	-		Rru_A2598	0.61	-0.0
3,020,409	-		Rru_A2598	0.76	-1.0
3,020,409	-		Rru_A2598	0.76	-1.0
3,020,409	-		Rru_A2598	0.76	+1.1
3,020,588	+				+0.7
3,020,588	+				-1.0
3,020,588	+				-0.0
3,020,589	-				+1.0
3,020,589	-				+1.0
3,020,687	+				+1.0
3,020,688	-				+1.0
3,020,688	-				+0.9
3,020,699	+				+1.0
3,020,699	+				+1.2
3,020,699	+				-0.0
3,020,699	+				+0.9
3,020,699	+				-1.6
3,020,700	-				+0.8
3,020,700	-				-0.0
3,020,700	-				-0.0
3,020,907	+		Rru_A2599	0.16	+0.8
3,020,907	+		Rru_A2599	0.16	+1.5
3,020,907	+		Rru_A2599	0.16	-0.0
3,020,908	-		Rru_A2599	0.16	+1.4
3,020,908	-		Rru_A2599	0.16	+0.9
3,020,908	-		Rru_A2599	0.16	-0.0
3,021,349	+		Rru_A2599	0.49	+1.6
3,021,349	+		Rru_A2599	0.49	-0.0
3,021,349	+		Rru_A2599	0.49	-1.0
3,021,349	+		Rru_A2599	0.49	-0.0
3,021,349	+		Rru_A2599	0.49	+0.2
3,021,350	-		Rru_A2599	0.49	+1.5
3,021,350	-		Rru_A2599	0.49	-0.0
3,021,350	-		Rru_A2599	0.49	+1.3
3,021,350	-		Rru_A2599	0.49	+1.1
3,021,350	-		Rru_A2599	0.49	-1.0
3,021,352	+		Rru_A2599	0.49	+2.1
3,021,352	+		Rru_A2599	0.49	+1.4
3,021,352	+		Rru_A2599	0.49	+1.0
3,021,353	-		Rru_A2599	0.49	+0.8
3,021,546	+		Rru_A2599	0.63	+0.6
3,021,546	+		Rru_A2599	0.63	+1.2
3,021,546	+		Rru_A2599	0.63	-0.0
3,021,547	-		Rru_A2599	0.63	+1.3
3,021,547	-		Rru_A2599	0.63	-0.0
3,021,593	+		Rru_A2599	0.67	+0.4
3,021,594	-		Rru_A2599	0.67	+1.1
3,021,594	-		Rru_A2599	0.67	+0.4