Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2541

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,953,664	+		Rru_A2540	0.23	+0.9
2,953,664	+		Rru_A2540	0.23	-0.0
2,953,664	+		Rru_A2540	0.23	+1.1
2,953,664	+		Rru_A2540	0.23	+1.7
2,953,665	-		Rru_A2540	0.23	+0.9
2,953,715	+		Rru_A2540	0.28	+1.0
2,953,715	+		Rru_A2540	0.28	-0.0
2,953,716	-		Rru_A2540	0.28	-0.0
2,953,813	+		Rru_A2540	0.36	+1.3
2,953,813	+		Rru_A2540	0.36	+1.4
2,953,813	+		Rru_A2540	0.36	+1.4
2,953,814	-		Rru_A2540	0.36	+1.4
2,953,814	-		Rru_A2540	0.36	+1.8
2,953,814	-		Rru_A2540	0.36	-0.0
2,953,814	-		Rru_A2540	0.36	+1.1
2,953,814	-		Rru_A2540	0.36	+1.2
2,953,814	-		Rru_A2540	0.36	-0.0
2,953,814	-		Rru_A2540	0.36	+1.2
2,954,054	+		Rru_A2540	0.57	+0.7
2,954,054	+		Rru_A2540	0.57	+0.6
2,954,054	+		Rru_A2540	0.57	+1.1
2,954,054	+		Rru_A2540	0.57	-0.0
2,954,054	+		Rru_A2540	0.57	+1.3
2,954,055	-		Rru_A2540	0.57	+1.0
2,954,055	-		Rru_A2540	0.57	+0.1
2,954,055	-		Rru_A2540	0.57	+1.7
2,954,055	-		Rru_A2540	0.57	+1.0
2,954,056	+		Rru_A2540	0.57	-0.0
2,954,056	+		Rru_A2540	0.57	+1.0
2,954,057	-		Rru_A2540	0.57	+1.2
2,954,108	+		Rru_A2540	0.61	-0.5
2,954,108	+		Rru_A2540	0.61	+2.1
2,954,108	+		Rru_A2540	0.61	+2.0
2,954,108	+		Rru_A2540	0.61	+1.2
2,954,109	-		Rru_A2540	0.61	+0.9
2,954,109	-		Rru_A2540	0.61	+1.5
2,954,109	-		Rru_A2540	0.61	-1.0
2,954,109	-		Rru_A2540	0.61	+0.3
2,954,109	-		Rru_A2540	0.61	-0.0
2,954,109	-		Rru_A2540	0.61	+1.1
2,954,109	-		Rru_A2540	0.61	-0.0
2,954,110	+		Rru_A2540	0.61	-0.0
2,954,110	+		Rru_A2540	0.61	-0.0
2,954,110	+		Rru_A2540	0.61	+0.8
2,954,111	-		Rru_A2540	0.61	-0.0
2,954,111	-		Rru_A2540	0.61	+0.5
2,954,111	-		Rru_A2540	0.61	-0.0
2,954,261	+		Rru_A2540	0.74	+1.3
2,954,261	+		Rru_A2540	0.74	+1.5
2,954,261	+		Rru_A2540	0.74	+1.2
2,954,558	+				+1.0
2,954,558	+				-0.0
2,954,559	-				+1.3
2,954,562	+				+1.3
2,954,562	+				-0.0
2,954,563	-				-0.0
2,954,580	+				+1.4
2,954,967	+		Rru_A2541	0.69	+1.8
2,954,967	+		Rru_A2541	0.69	+2.1
2,954,967	+		Rru_A2541	0.69	+2.2
2,954,967	+		Rru_A2541	0.69	+2.3
2,954,967	+		Rru_A2541	0.69	-0.0
2,954,967	+		Rru_A2541	0.69	+1.3
2,954,968	-		Rru_A2541	0.69	+0.6
2,954,968	-		Rru_A2541	0.69	-0.0
2,954,968	-		Rru_A2541	0.69	-0.0
2,955,150	+				+1.5
2,955,151	-				+0.6
2,955,151	-				+0.5
2,955,151	-				+1.5
2,955,151	-				+0.8
2,955,151	-				+0.5
2,955,151	-				-0.0
2,955,190	-				-0.0
2,955,190	-				-0.0
2,955,190	-				+0.6
2,955,190	-				-0.0
2,955,208	-				-0.0
2,955,215	+				+1.7
2,955,216	-				+0.9
2,955,575	-				-0.0
2,955,648	+				+0.1
2,955,841	+		Rru_A2542	0.17	+1.1
2,955,841	+		Rru_A2542	0.17	-0.0
2,955,842	-		Rru_A2542	0.17	+1.1
2,955,881	+		Rru_A2542	0.19	-1.0
2,955,881	+		Rru_A2542	0.19	-1.6
2,956,109	+		Rru_A2542	0.33	+1.3
2,956,109	+		Rru_A2542	0.33	+1.2
2,956,109	+		Rru_A2542	0.33	+1.1
2,956,109	+		Rru_A2542	0.33	-0.0
2,956,109	+		Rru_A2542	0.33	-0.0
2,956,110	-		Rru_A2542	0.33	+1.4
2,956,110	-		Rru_A2542	0.33	+0.7
2,956,110	-		Rru_A2542	0.33	+1.1
2,956,110	-		Rru_A2542	0.33	-0.0
2,956,110	-		Rru_A2542	0.33	+1.0
2,956,110	-		Rru_A2542	0.33	+1.2