Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2513

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,920,230	+				-0.0
2,920,329	+				+2.5
2,920,329	+				+0.7
2,920,329	+				-0.0
2,920,356	+				-0.0
2,920,357	-				-0.0
2,920,357	-				-0.0
2,920,357	-				-1.0
2,920,357	-				-0.0
2,920,357	-				-0.0
2,920,474	-		Rru_A2512	0.20	-1.9
2,920,599	+		Rru_A2512	0.37	-0.0
2,920,600	-		Rru_A2512	0.37	-0.0
2,920,626	+		Rru_A2512	0.41	+1.3
2,920,626	+		Rru_A2512	0.41	-0.0
2,920,627	-		Rru_A2512	0.41	-1.0
2,920,627	-		Rru_A2512	0.41	-2.6
2,920,627	-		Rru_A2512	0.41	-0.0
2,920,649	-		Rru_A2512	0.44	-0.0
2,920,649	-		Rru_A2512	0.44	-0.8
2,920,969	+		Rru_A2512	0.88	-0.0
2,921,050	+				-0.0
2,921,070	+				-0.0
2,921,070	+				+0.7
2,921,123	-				-0.0
2,921,123	-				-0.0
2,921,147	-				-0.0
2,921,460	-		Rru_A2513	0.18	+0.5
2,921,664	-		Rru_A2513	0.32	+0.9
2,921,703	+		Rru_A2513	0.35	+1.5
2,921,703	+		Rru_A2513	0.35	-1.6
2,921,703	+		Rru_A2513	0.35	+1.0
2,921,704	-		Rru_A2513	0.35	+1.5
2,921,704	-		Rru_A2513	0.35	+0.3
2,921,706	-		Rru_A2513	0.35	+0.7
2,921,706	-		Rru_A2513	0.35	+0.1
2,921,706	-		Rru_A2513	0.35	-0.0
2,921,816	+		Rru_A2513	0.43	-0.0
2,921,830	-		Rru_A2513	0.44	+0.7
2,922,200	+		Rru_A2513	0.69	+0.6
2,922,200	+		Rru_A2513	0.69	-0.0
2,922,200	+		Rru_A2513	0.69	-0.0
2,922,200	+		Rru_A2513	0.69	+1.0
2,922,200	+		Rru_A2513	0.69	+1.3
2,922,201	-		Rru_A2513	0.69	+0.5
2,922,201	-		Rru_A2513	0.69	+1.1
2,922,201	-		Rru_A2513	0.69	+1.3
2,922,201	-		Rru_A2513	0.69	-1.0
2,922,201	-		Rru_A2513	0.69	+0.4
2,922,201	-		Rru_A2513	0.69	-0.0
2,922,201	-		Rru_A2513	0.69	-0.0
2,922,344	+		Rru_A2513	0.79	+1.3
2,922,344	+		Rru_A2513	0.79	+0.7
2,922,345	-		Rru_A2513	0.79	+0.5
2,922,345	-		Rru_A2513	0.79	-1.0
2,922,345	-		Rru_A2513	0.79	+0.3
2,922,345	-		Rru_A2513	0.79	-0.0
2,922,347	+		Rru_A2513	0.79	-1.0
2,922,347	+		Rru_A2513	0.79	+1.0
2,922,347	+		Rru_A2513	0.79	+0.3
2,922,347	+		Rru_A2513	0.79	+1.0
2,922,348	-		Rru_A2513	0.80	+0.9
2,922,348	-		Rru_A2513	0.80	+0.5
2,922,348	-		Rru_A2513	0.80	-0.0
2,922,348	-		Rru_A2513	0.80	-1.0
2,922,484	-		Rru_A2513	0.89	+0.4
2,922,500	+				+1.3
2,922,581	+				-0.0
2,922,582	-				+1.2
2,922,582	-				+1.7
2,922,582	-				+0.7
2,922,582	-				-0.0
2,922,592	+				+0.6
2,922,592	+				+1.7
2,922,592	+				+0.5
2,922,593	-				+1.2
2,922,593	-				+1.0
2,922,593	-				-0.0
2,922,617	+				-0.0
2,922,618	-				+1.4
2,922,834	-				-0.0
2,922,836	+				-0.0
2,923,055	+		Rru_A2514	0.49	+1.7
2,923,056	-		Rru_A2514	0.49	+1.7
2,923,056	-		Rru_A2514	0.49	+2.0
2,923,169	+		Rru_A2514	0.69	-1.0
2,923,170	-		Rru_A2514	0.69	-0.0
2,923,170	-		Rru_A2514	0.69	+1.0
2,923,170	-		Rru_A2514	0.69	-0.0
2,923,420	+				+0.6
2,923,420	+				+0.9
2,923,483	+				+1.2
2,923,483	+				+1.5
2,923,484	-				+1.7
2,923,484	-				-0.0
2,923,484	-				-0.0
2,923,515	-				-0.0
2,923,515	-				+1.1