Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2428

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,827,147	-				+0.9
2,827,147	-				-0.1
2,827,147	-				+1.6
2,827,147	-				+1.5
2,827,147	-				+1.7
2,827,194	+		Rru_A2427	0.12	+1.8
2,827,305	+		Rru_A2427	0.27	-0.1
2,827,305	+		Rru_A2427	0.27	+2.2
2,827,314	+		Rru_A2427	0.29	-0.1
2,827,314	+		Rru_A2427	0.29	-0.1
2,827,314	+		Rru_A2427	0.29	+2.3
2,827,315	-		Rru_A2427	0.29	+2.2
2,827,315	-		Rru_A2427	0.29	+1.2
2,827,315	-		Rru_A2427	0.29	+1.1
2,828,264	-		Rru_A2428	0.43	+0.4
2,828,338	+		Rru_A2428	0.53	+0.2
2,828,338	+		Rru_A2428	0.53	-1.1
2,828,338	+		Rru_A2428	0.53	+1.2
2,828,338	+		Rru_A2428	0.53	+0.9
2,828,338	+		Rru_A2428	0.53	+0.8
2,828,338	+		Rru_A2428	0.53	+1.4
2,828,339	-		Rru_A2428	0.53	+0.1
2,828,339	-		Rru_A2428	0.53	-1.1
2,828,339	-		Rru_A2428	0.53	+1.2
2,828,339	-		Rru_A2428	0.53	-1.1
2,828,339	-		Rru_A2428	0.53	+1.0
2,828,419	+		Rru_A2428	0.64	+0.2
2,828,420	-		Rru_A2428	0.64	-0.1
2,828,695	+				+0.7
2,828,695	+				+0.8
2,828,803	+				-0.1
2,828,848	-				+0.6
2,828,863	+				-0.1
2,828,863	+				+2.7
2,829,050	+		Rru_A2429	0.68	+1.1
2,829,083	-		Rru_A2429	0.80	-0.5
2,829,116	-				-0.1
2,829,117	+				+1.6
2,829,131	+				-0.1
2,829,131	+				-0.1
2,829,131	+				-0.1
2,829,132	-				-0.1
2,829,238	+				+0.9
2,829,241	-				-1.1
2,829,611	-				-0.7
2,829,679	+				-0.1
2,829,680	-				+0.9