Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2424

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,823,071	+		Rru_A2423	0.29	+0.9
2,823,071	+		Rru_A2423	0.29	+0.3
2,823,072	-		Rru_A2423	0.29	-0.1
2,823,072	-		Rru_A2423	0.29	+0.3
2,823,254	+		Rru_A2423	0.45	+0.9
2,823,255	-		Rru_A2423	0.45	+2.4
2,823,255	-		Rru_A2423	0.45	+0.4
2,823,269	+		Rru_A2423	0.46	-0.1
2,823,269	+		Rru_A2423	0.46	+0.8
2,823,269	+		Rru_A2423	0.46	+0.4
2,823,269	+		Rru_A2423	0.46	+0.8
2,823,270	-		Rru_A2423	0.46	-0.1
2,823,270	-		Rru_A2423	0.46	-0.1
2,823,270	-		Rru_A2423	0.46	+0.4
2,823,270	-		Rru_A2423	0.46	-0.1
2,823,311	+		Rru_A2423	0.49	+1.5
2,823,311	+		Rru_A2423	0.49	+0.5
2,823,641	+		Rru_A2423	0.77	+1.1
2,823,642	-		Rru_A2423	0.77	-0.1
2,823,691	-		Rru_A2423	0.81	-0.1
2,823,691	-		Rru_A2423	0.81	-0.1
2,823,691	-		Rru_A2423	0.81	+0.5
2,823,691	-		Rru_A2423	0.81	+0.0
2,823,691	-		Rru_A2423	0.81	+0.8
2,823,693	-		Rru_A2423	0.81	+1.1
2,823,693	-		Rru_A2423	0.81	+0.9
2,823,840	+				+0.5
2,823,852	+				+0.8
2,823,853	-				-0.1
2,823,853	-				+0.7
2,823,853	-				+0.7
2,823,947	+				-1.1
2,823,947	+				+1.6
2,823,947	+				-0.1
2,824,023	+				-0.1
2,824,023	+				-0.1
2,824,346	+		Rru_A2424	0.33	-0.1
2,824,346	+		Rru_A2424	0.33	+0.3
2,824,347	-		Rru_A2424	0.33	-0.1
2,824,347	-		Rru_A2424	0.33	+1.7
2,824,623	+		Rru_A2424	0.55	-0.0
2,824,794	-		Rru_A2424	0.69	-1.1
2,824,794	-		Rru_A2424	0.69	-0.1
2,824,881	-		Rru_A2424	0.76	+0.4
2,824,953	-		Rru_A2424	0.82	-2.1
2,825,065	-				-0.1
2,825,129	+				-1.1
2,825,175	+				+0.7
2,825,175	+				+0.9
2,825,241	+				-0.3
2,825,242	-				-0.1