Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2375

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,767,754	+		Rru_A2374	0.63	+1.6
2,767,754	+		Rru_A2374	0.63	+1.2
2,767,754	+		Rru_A2374	0.63	+1.4
2,767,754	+		Rru_A2374	0.63	+1.0
2,767,832	+		Rru_A2374	0.66	-0.1
2,767,833	-		Rru_A2374	0.66	-0.1
2,767,955	-		Rru_A2374	0.71	+1.6
2,767,964	+		Rru_A2374	0.71	+2.1
2,767,982	+		Rru_A2374	0.72	+0.9
2,768,009	+		Rru_A2374	0.73	+0.9
2,768,018	+		Rru_A2374	0.73	+1.2
2,768,018	+		Rru_A2374	0.73	-0.1
2,768,111	+		Rru_A2374	0.77	+0.9
2,768,111	+		Rru_A2374	0.77	+0.8
2,768,111	+		Rru_A2374	0.77	-0.1
2,768,111	+		Rru_A2374	0.77	+0.9
2,768,111	+		Rru_A2374	0.77	-0.1
2,768,111	+		Rru_A2374	0.77	+1.0
2,768,112	-		Rru_A2374	0.77	-0.1
2,768,112	-		Rru_A2374	0.77	+1.2
2,768,112	-		Rru_A2374	0.77	+1.8
2,768,201	+		Rru_A2374	0.81	+1.6
2,768,201	+		Rru_A2374	0.81	+1.0
2,768,201	+		Rru_A2374	0.81	-0.1
2,768,202	-		Rru_A2374	0.81	+1.1
2,768,202	-		Rru_A2374	0.81	+0.9
2,768,202	-		Rru_A2374	0.81	+0.5
2,768,294	+		Rru_A2374	0.85	-0.1
2,768,294	+		Rru_A2374	0.85	-0.1
2,768,295	-		Rru_A2374	0.85	-0.1
2,768,295	-		Rru_A2374	0.85	+1.0
2,768,295	-		Rru_A2374	0.85	+0.5
2,768,295	-		Rru_A2374	0.85	-1.1
2,768,295	-		Rru_A2374	0.85	+0.9
2,768,296	+		Rru_A2374	0.85	-0.1
2,768,296	+		Rru_A2374	0.85	+0.0
2,768,296	+		Rru_A2374	0.85	+1.1
2,768,296	+		Rru_A2374	0.85	-0.1
2,768,296	+		Rru_A2374	0.85	+0.8
2,768,296	+		Rru_A2374	0.85	+0.4
2,768,296	+		Rru_A2374	0.85	-0.1
2,768,296	+		Rru_A2374	0.85	+0.9
2,768,296	+		Rru_A2374	0.85	+1.3
2,768,296	+		Rru_A2374	0.85	-0.7
2,768,296	+		Rru_A2374	0.85	+0.8
2,768,297	-		Rru_A2374	0.85	-1.7
2,768,297	-		Rru_A2374	0.85	+1.3
2,768,297	-		Rru_A2374	0.85	+0.9
2,768,297	-		Rru_A2374	0.85	+0.5
2,768,297	-		Rru_A2374	0.85	-1.1
2,768,297	-		Rru_A2374	0.85	-0.1
2,768,297	-		Rru_A2374	0.85	-0.1
2,768,300	+		Rru_A2374	0.85	-0.1
2,768,300	+		Rru_A2374	0.85	+2.4
2,768,301	-		Rru_A2374	0.85	-0.1
2,768,388	-		Rru_A2374	0.88	+1.7
2,768,388	-		Rru_A2374	0.88	+0.4
2,768,388	-		Rru_A2374	0.88	+1.3
2,768,444	+				-1.1
2,768,445	-				-0.1
2,768,519	+				+0.7
2,768,624	+				+0.8
2,768,625	-				-0.7
2,768,673	-				-2.1
2,768,702	+				+0.1
2,768,716	-				+1.6
2,768,725	-				+1.1
2,768,725	-				+1.2
2,768,899	+		Rru_A2375	0.59	+1.2
2,768,900	-		Rru_A2375	0.60	+1.3
2,769,034	+				+1.0
2,769,035	-				+0.4
2,769,037	+				+1.2
2,769,038	-				+1.0
2,769,039	+				-2.1
2,769,039	+				-0.5
2,769,105	+				+1.4
2,769,105	+				+1.5
2,769,105	+				+0.4
2,769,106	-				-1.1
2,769,190	-		Rru_A2376	0.32	-0.1
2,769,201	+		Rru_A2376	0.36	+1.9
2,769,202	-		Rru_A2376	0.37	-1.1
2,769,202	-		Rru_A2376	0.37	+1.6
2,769,202	-		Rru_A2376	0.37	-1.1
2,769,590	+		Rru_A2377	0.72	+0.9
2,769,692	+				-0.1
2,769,693	-				+0.8
2,769,694	+				+0.9
2,769,694	+				+1.1
2,769,695	-				-2.1
2,769,695	-				+0.5
2,769,899	+				+0.6
2,769,954	+		Rru_A2378	0.15	+0.5
2,770,004	+		Rru_A2378	0.25	+1.1