Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2319

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,686,170	+		Rru_A2318	0.38	-1.9
2,686,171	-		Rru_A2318	0.38	+1.7
2,686,171	-		Rru_A2318	0.38	-0.1
2,686,252	-		Rru_A2318	0.44	-0.1
2,686,252	-		Rru_A2318	0.44	+0.7
2,686,252	-		Rru_A2318	0.44	+0.9
2,686,332	+		Rru_A2318	0.49	-2.4
2,686,333	-		Rru_A2318	0.49	-0.1
2,686,387	-		Rru_A2318	0.53	+1.2
2,686,440	+		Rru_A2318	0.56	-1.5
2,686,441	-		Rru_A2318	0.56	+1.6
2,686,441	-		Rru_A2318	0.56	+1.4
2,686,452	+		Rru_A2318	0.57	+1.5
2,686,453	-		Rru_A2318	0.57	+1.6
2,686,453	-		Rru_A2318	0.57	-0.3
2,686,453	-		Rru_A2318	0.57	-0.1
2,686,465	-		Rru_A2318	0.58	+1.2
2,686,570	-		Rru_A2318	0.65	-0.1
2,686,651	-		Rru_A2318	0.70	-0.1
2,686,651	-		Rru_A2318	0.70	+0.9
2,686,651	-		Rru_A2318	0.70	-0.1
2,686,651	-		Rru_A2318	0.70	+0.4
2,686,702	-		Rru_A2318	0.74	+0.9
2,686,924	-		Rru_A2318	0.88	-1.1
2,687,174	+				+1.0
2,687,226	+				+1.8
2,687,226	+				+1.1
2,687,227	-				+1.5
2,687,227	-				-0.1
2,687,227	-				+1.2
2,687,229	-		Rru_A2319	0.10	-0.1
2,687,229	-		Rru_A2319	0.10	-0.1
2,687,314	-		Rru_A2319	0.17	+1.4
2,687,314	-		Rru_A2319	0.17	+0.8
2,687,314	-		Rru_A2319	0.17	+1.3
2,687,323	-		Rru_A2319	0.18	-0.1
2,687,532	+		Rru_A2319	0.36	-0.1
2,687,532	+		Rru_A2319	0.36	-0.1
2,687,533	-		Rru_A2319	0.36	+1.1
2,687,533	-		Rru_A2319	0.36	+1.5
2,687,533	-		Rru_A2319	0.36	+1.8
2,687,533	-		Rru_A2319	0.36	+1.2
2,687,538	+		Rru_A2319	0.37	-0.1
2,687,544	+		Rru_A2319	0.37	+1.2
2,687,745	+		Rru_A2319	0.55	-0.1
2,687,745	+		Rru_A2319	0.55	-0.1
2,687,745	+		Rru_A2319	0.55	-0.1
2,687,745	+		Rru_A2319	0.55	-0.1
2,687,745	+		Rru_A2319	0.55	+1.1
2,687,745	+		Rru_A2319	0.55	+1.0
2,687,745	+		Rru_A2319	0.55	-0.1
2,687,745	+		Rru_A2319	0.55	-0.1
2,687,745	+		Rru_A2319	0.55	+0.9
2,687,745	+		Rru_A2319	0.55	+1.5
2,687,745	+		Rru_A2319	0.55	+1.8
2,687,746	-		Rru_A2319	0.55	+1.2
2,687,746	-		Rru_A2319	0.55	-1.1
2,687,746	-		Rru_A2319	0.55	-0.1
2,687,746	-		Rru_A2319	0.55	+1.5
2,687,746	-		Rru_A2319	0.55	+1.2
2,687,746	-		Rru_A2319	0.55	+1.0
2,687,833	-		Rru_A2319	0.62	+0.9
2,687,833	-		Rru_A2319	0.62	+1.7
2,687,916	+		Rru_A2319	0.69	+0.1
2,687,997	+		Rru_A2319	0.76	+0.8
2,687,997	+		Rru_A2319	0.76	-0.1
2,687,997	+		Rru_A2319	0.76	-0.1
2,688,066	+		Rru_A2319	0.82	-0.1
2,688,067	-		Rru_A2319	0.82	+0.6
2,688,067	-		Rru_A2319	0.82	+2.1
2,688,067	-		Rru_A2319	0.82	-0.1
2,688,081	+		Rru_A2319	0.83	-1.1
2,688,082	-		Rru_A2319	0.84	+1.6
2,688,082	-		Rru_A2319	0.84	+1.0
2,688,082	-		Rru_A2319	0.84	-0.1
2,688,082	-		Rru_A2319	0.84	+1.5
2,688,207	+				-0.1
2,688,207	+				+0.4
2,688,207	+				+1.4
2,688,207	+				+0.9
2,688,208	-				+1.0
2,688,288	+				+1.7
2,688,289	-				-0.1
2,688,432	+		Rru_A2320	0.16	+0.9
2,688,432	+		Rru_A2320	0.16	-0.1
2,688,432	+		Rru_A2320	0.16	-0.1
2,688,433	-		Rru_A2320	0.16	+1.8
2,688,433	-		Rru_A2320	0.16	-0.1
2,688,433	-		Rru_A2320	0.16	+1.6
2,688,433	-		Rru_A2320	0.16	-0.1
2,688,570	+		Rru_A2320	0.31	+1.3
2,688,820	+		Rru_A2320	0.58	-0.1
2,688,820	+		Rru_A2320	0.58	+1.4
2,688,820	+		Rru_A2320	0.58	+0.8
2,688,822	+		Rru_A2320	0.59	+0.8
2,688,822	+		Rru_A2320	0.59	+1.1
2,688,823	-		Rru_A2320	0.59	+0.9
2,688,823	-		Rru_A2320	0.59	+1.1
2,688,823	-		Rru_A2320	0.59	+0.6
2,688,866	+		Rru_A2320	0.63	-1.7
2,688,866	+		Rru_A2320	0.63	+1.4
2,688,867	-		Rru_A2320	0.64	-0.1
2,688,985	-		Rru_A2320	0.76	+2.0
2,689,047	+		Rru_A2320	0.83	+0.3
2,689,048	-		Rru_A2320	0.83	-0.1
2,689,048	-		Rru_A2320	0.83	+0.4
2,689,116	+				-0.1
2,689,117	-				+2.0
2,689,140	+				-0.1
2,689,141	-				+0.8
2,689,141	-				+1.0
2,689,141	-				+1.4