Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2300

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,660,480	+		Rru_A2299	0.22	+0.9
2,660,480	+		Rru_A2299	0.22	-0.1
2,660,480	+		Rru_A2299	0.22	+1.1
2,660,481	-		Rru_A2299	0.22	-2.1
2,660,493	-		Rru_A2299	0.23	-0.1
2,660,567	+		Rru_A2299	0.30	+0.4
2,660,567	+		Rru_A2299	0.30	+1.3
2,660,567	+		Rru_A2299	0.30	-0.1
2,660,568	-		Rru_A2299	0.30	+0.4
2,660,568	-		Rru_A2299	0.30	-0.1
2,660,568	-		Rru_A2299	0.30	-0.7
2,660,568	-		Rru_A2299	0.30	+0.9
2,660,574	-		Rru_A2299	0.31	-0.4
2,660,574	-		Rru_A2299	0.31	-0.1
2,661,085	+		Rru_A2299	0.82	+1.2
2,661,110	+		Rru_A2299	0.84	+1.2
2,661,110	+		Rru_A2299	0.84	-0.1
2,661,111	-		Rru_A2299	0.84	-0.1
2,661,111	-		Rru_A2299	0.84	-0.1
2,661,132	-		Rru_A2299	0.86	+1.4
2,661,134	+		Rru_A2299	0.86	+2.3
2,661,135	-		Rru_A2299	0.87	-1.1
2,661,147	+		Rru_A2299	0.88	+1.6
2,661,147	+		Rru_A2299	0.88	-0.1
2,661,595	+		Rru_A2300	0.32	+1.5
2,661,596	-		Rru_A2300	0.32	-0.1
2,661,667	+		Rru_A2300	0.39	+0.4
2,661,667	+		Rru_A2300	0.39	+0.8
2,661,667	+		Rru_A2300	0.39	+0.7
2,661,667	+		Rru_A2300	0.39	+1.4
2,661,667	+		Rru_A2300	0.39	-0.1
2,661,667	+		Rru_A2300	0.39	-1.1
2,661,667	+		Rru_A2300	0.39	+1.7
2,661,667	+		Rru_A2300	0.39	+1.0
2,661,667	+		Rru_A2300	0.39	+1.3
2,661,667	+		Rru_A2300	0.39	+1.3
2,661,667	+		Rru_A2300	0.39	+1.4
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	+0.4
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	+0.8
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,668	-		Rru_A2300	0.39	-0.1
2,661,689	+		Rru_A2300	0.41	+1.3
2,661,690	-		Rru_A2300	0.41	-0.3
2,661,730	+		Rru_A2300	0.46	+1.1
2,661,730	+		Rru_A2300	0.46	+1.3
2,661,730	+		Rru_A2300	0.46	+0.9
2,661,757	+		Rru_A2300	0.48	+1.0
2,661,757	+		Rru_A2300	0.48	-0.1
2,661,757	+		Rru_A2300	0.48	-0.1
2,661,888	-		Rru_A2300	0.62	-0.1
2,661,888	-		Rru_A2300	0.62	-0.1
2,662,042	+		Rru_A2300	0.77	+0.5
2,662,042	+		Rru_A2300	0.77	+0.0
2,662,042	+		Rru_A2300	0.77	+1.8
2,662,042	+		Rru_A2300	0.77	-0.1
2,662,042	+		Rru_A2300	0.77	-1.1
2,662,042	+		Rru_A2300	0.77	-0.1
2,662,042	+		Rru_A2300	0.77	+1.2
2,662,043	-		Rru_A2300	0.78	-1.1
2,662,043	-		Rru_A2300	0.78	+0.6
2,662,043	-		Rru_A2300	0.78	-1.1
2,662,043	-		Rru_A2300	0.78	+0.7
2,662,163	+		Rru_A2300	0.90	+1.1
2,662,164	-		Rru_A2300	0.90	+1.1
2,662,164	-		Rru_A2300	0.90	+0.9
2,662,361	+				-0.1
2,662,361	+				+0.9
2,662,361	+				-0.1
2,662,361	+				-0.1
2,662,696	+		Rru_A2301	0.27	-0.1
2,662,696	+		Rru_A2301	0.27	-0.1
2,662,697	-		Rru_A2301	0.27	-0.1
2,662,697	-		Rru_A2301	0.27	-0.1
2,662,697	-		Rru_A2301	0.27	+1.2
2,662,771	+		Rru_A2301	0.32	-0.1
2,662,771	+		Rru_A2301	0.32	-0.1
2,662,771	+		Rru_A2301	0.32	+1.9
2,662,771	+		Rru_A2301	0.32	-0.1
2,662,772	-		Rru_A2301	0.32	+0.9
2,662,772	-		Rru_A2301	0.32	+1.3
2,662,772	-		Rru_A2301	0.32	-1.1
2,662,772	-		Rru_A2301	0.32	+0.9
2,662,772	-		Rru_A2301	0.32	+0.6
2,662,779	-		Rru_A2301	0.32	+1.2
2,662,976	+		Rru_A2301	0.45	+1.3
2,663,029	+		Rru_A2301	0.48	+0.6
2,663,045	+		Rru_A2301	0.49	+1.1
2,663,060	+		Rru_A2301	0.50	+0.7
2,663,061	-		Rru_A2301	0.50	+1.0