Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2258

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,618,291	-				-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,585	+		Rru_A2257	0.34	-0.1
2,618,586	-		Rru_A2257	0.34	-1.1
2,618,586	-		Rru_A2257	0.34	-0.1
2,618,768	+		Rru_A2257	0.54	-0.1
2,618,769	-		Rru_A2257	0.54	-0.1
2,618,783	+		Rru_A2257	0.56	-0.1
2,618,847	-		Rru_A2257	0.63	-0.1
2,618,847	-		Rru_A2257	0.63	-0.1
2,618,953	+		Rru_A2257	0.74	-0.1
2,618,953	+		Rru_A2257	0.74	+1.3
2,618,953	+		Rru_A2257	0.74	-1.1
2,618,953	+		Rru_A2257	0.74	-1.7
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,618,954	-		Rru_A2257	0.74	-0.1
2,619,005	+		Rru_A2257	0.80	-0.1
2,619,005	+		Rru_A2257	0.80	-0.1
2,619,006	-		Rru_A2257	0.80	-0.1
2,619,006	-		Rru_A2257	0.80	-0.1
2,619,006	-		Rru_A2257	0.80	-1.7
2,619,007	+		Rru_A2257	0.80	-0.1
2,619,185	+				+0.5
2,619,185	+				+1.0
2,619,186	-				-0.1
2,619,233	-				+0.6
2,619,238	+				+1.3
2,619,246	+				+1.2
2,619,486	+		Rru_A2258	0.28	-1.1
2,619,486	+		Rru_A2258	0.28	-0.1
2,619,486	+		Rru_A2258	0.28	-0.1
2,619,486	+		Rru_A2258	0.28	-0.1
2,619,487	-		Rru_A2258	0.29	+1.1
2,619,487	-		Rru_A2258	0.29	-0.1
2,619,487	-		Rru_A2258	0.29	+1.1
2,619,487	-		Rru_A2258	0.29	-0.1
2,619,594	+		Rru_A2258	0.41	+1.0
2,619,854	-		Rru_A2258	0.73	+0.1
2,619,855	+		Rru_A2258	0.73	-0.1
2,619,855	+		Rru_A2258	0.73	-0.1
2,619,855	+		Rru_A2258	0.73	-0.1
2,619,855	+		Rru_A2258	0.73	-0.1
2,619,856	-		Rru_A2258	0.73	-0.1
2,619,856	-		Rru_A2258	0.73	-0.1
2,619,856	-		Rru_A2258	0.73	+0.2
2,619,883	-		Rru_A2258	0.76	+0.1
2,619,885	+		Rru_A2258	0.77	-0.1
2,619,885	+		Rru_A2258	0.77	+0.5
2,619,885	+		Rru_A2258	0.77	-1.1
2,619,885	+		Rru_A2258	0.77	+1.3
2,619,885	+		Rru_A2258	0.77	+0.9
2,619,885	+		Rru_A2258	0.77	+0.8
2,619,886	-		Rru_A2258	0.77	+1.1
2,619,886	-		Rru_A2258	0.77	+0.5
2,619,886	-		Rru_A2258	0.77	-0.1
2,619,886	-		Rru_A2258	0.77	-0.1
2,620,072	+				-0.1
2,620,073	-				+0.3
2,620,073	-				-0.1
2,620,073	-				+1.1
2,620,073	-				-0.1
2,620,201	+		Rru_A2259	0.14	-0.1
2,620,387	+		Rru_A2259	0.53	-0.8
2,620,387	+		Rru_A2259	0.53	+0.1
2,620,533	+		Rru_A2259	0.84	+0.9
2,620,534	-		Rru_A2259	0.84	+0.6
2,620,913	-		Rru_A2260	0.42	+1.2
2,621,024	-		Rru_A2260	0.63	-0.1