Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2250

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,611,940	+		Rru_A2249	0.51	+1.8
2,611,940	+		Rru_A2249	0.51	+1.6
2,611,941	-		Rru_A2249	0.51	-0.1
2,611,941	-		Rru_A2249	0.51	-0.1
2,612,002	+		Rru_A2249	0.57	-0.1
2,612,002	+		Rru_A2249	0.57	+2.1
2,612,221	+		Rru_A2249	0.78	-0.1
2,612,222	-		Rru_A2249	0.78	+1.1
2,612,222	-		Rru_A2249	0.78	+1.5
2,612,222	-		Rru_A2249	0.78	+1.4
2,612,222	-		Rru_A2249	0.78	-0.1
2,612,366	-				-0.1
2,612,366	-				-0.1
2,612,558	-				+0.7
2,612,601	+				-0.1
2,612,602	-				+0.9
2,612,602	-				-0.1
2,612,679	+				-0.1
2,612,679	+				-0.1
2,612,680	-				-0.1
2,612,680	-				+1.4
2,612,680	-				+1.0
2,612,680	-				-0.1
2,612,680	-				+0.8
2,612,680	-				-0.1
2,612,680	-				+1.3
2,612,680	-				+0.9
2,612,680	-				+1.7
2,612,680	-				-0.1
2,612,680	-				+1.3
2,612,680	-				+1.3
2,612,681	+				+0.9
2,612,681	+				-0.1
2,612,682	-				+1.3
2,612,682	-				-0.7
2,612,738	+				+0.8
2,612,739	-				+0.9
2,612,739	-				+1.0
2,612,777	+				+1.1
2,612,777	+				-0.1
2,612,778	-				+1.5
2,612,778	-				-0.1
2,612,778	-				+1.6
2,612,778	-				-0.1
2,613,358	+		Rru_A2250	0.84	+0.0
2,613,358	+		Rru_A2250	0.84	-0.1
2,613,358	+		Rru_A2250	0.84	-0.1
2,613,358	+		Rru_A2250	0.84	+1.4
2,613,359	-		Rru_A2250	0.84	+1.3
2,613,477	+				+0.6
2,613,478	-				-0.1
2,613,864	+		Rru_A2251	0.36	+1.1
2,613,865	-		Rru_A2251	0.36	+1.2
2,613,865	-		Rru_A2251	0.36	-0.1
2,613,933	+		Rru_A2251	0.45	+0.7
2,613,934	-		Rru_A2251	0.45	-0.1
2,613,934	-		Rru_A2251	0.45	+0.9
2,613,936	+		Rru_A2251	0.45	+0.2
2,613,936	+		Rru_A2251	0.45	-1.1
2,613,936	+		Rru_A2251	0.45	-1.1
2,613,937	-		Rru_A2251	0.45	-2.1
2,613,937	-		Rru_A2251	0.45	+0.6
2,613,937	-		Rru_A2251	0.45	+1.3
2,613,937	-		Rru_A2251	0.45	+1.1
2,613,937	-		Rru_A2251	0.45	+0.9
2,613,937	-		Rru_A2251	0.45	-0.1
2,613,938	+		Rru_A2251	0.45	+0.7
2,613,938	+		Rru_A2251	0.45	+2.2
2,613,938	+		Rru_A2251	0.45	+0.5
2,613,938	+		Rru_A2251	0.45	+1.7
2,613,939	-		Rru_A2251	0.45	-0.1
2,613,939	-		Rru_A2251	0.45	+1.1
2,613,939	-		Rru_A2251	0.45	+0.9
2,613,939	-		Rru_A2251	0.45	-0.1
2,613,939	-		Rru_A2251	0.45	-0.1
2,613,939	-		Rru_A2251	0.45	+1.1
2,614,089	+		Rru_A2251	0.64	-0.1
2,614,089	+		Rru_A2251	0.64	+1.1
2,614,090	-		Rru_A2251	0.65	+1.4
2,614,110	+		Rru_A2251	0.67	+0.9
2,614,110	+		Rru_A2251	0.67	+0.5
2,614,111	-		Rru_A2251	0.67	+0.1
2,614,158	+		Rru_A2251	0.73	-0.1
2,614,158	+		Rru_A2251	0.73	+0.7
2,614,158	+		Rru_A2251	0.73	+1.4
2,614,158	+		Rru_A2251	0.73	+1.4
2,614,158	+		Rru_A2251	0.73	+1.5
2,614,158	+		Rru_A2251	0.73	+0.7
2,614,158	+		Rru_A2251	0.73	+1.6
2,614,158	+		Rru_A2251	0.73	+0.5
2,614,159	-		Rru_A2251	0.73	+0.7
2,614,159	-		Rru_A2251	0.73	+0.5
2,614,159	-		Rru_A2251	0.73	-0.1
2,614,159	-		Rru_A2251	0.73	+1.5
2,614,167	+		Rru_A2251	0.74	-0.1
2,614,167	+		Rru_A2251	0.74	-0.1
2,614,167	+		Rru_A2251	0.74	-0.1
2,614,168	-		Rru_A2251	0.74	+1.1
2,614,168	-		Rru_A2251	0.74	+1.5
2,614,200	+		Rru_A2251	0.78	+1.8
2,614,201	-		Rru_A2251	0.79	-0.1
2,614,201	-		Rru_A2251	0.79	+1.2
2,614,201	-		Rru_A2251	0.79	+1.1
2,614,323	+				+0.9
2,614,323	+				+1.2
2,614,323	+				+1.5
2,614,324	-				+0.9
2,614,324	-				+1.3
2,614,324	-				+0.9
2,614,324	-				+0.9
2,614,324	-				-0.1
2,614,344	+				-0.1
2,614,344	+				-0.1
2,614,344	+				-0.1
2,614,345	-				-1.1
2,614,345	-				+0.8
2,614,368	+				+0.4
2,614,368	+				-1.7
2,614,369	-				-1.1
2,614,380	+				-0.1
2,614,380	+				+1.5
2,614,434	+				+1.3
2,614,435	-				-0.1
2,614,435	-				+0.7