Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2192

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,545,124	-		Rru_A2191	0.55	+1.2
2,545,158	+		Rru_A2191	0.57	+1.2
2,545,158	+		Rru_A2191	0.57	+1.0
2,545,158	+		Rru_A2191	0.57	+1.2
2,545,209	+		Rru_A2191	0.60	+0.3
2,545,209	+		Rru_A2191	0.60	+0.9
2,545,209	+		Rru_A2191	0.60	+1.5
2,545,209	+		Rru_A2191	0.60	+0.6
2,545,210	-		Rru_A2191	0.60	-0.1
2,545,210	-		Rru_A2191	0.60	+1.1
2,545,210	-		Rru_A2191	0.60	+0.0
2,545,210	-		Rru_A2191	0.60	-0.1
2,545,210	-		Rru_A2191	0.60	+0.9
2,545,210	-		Rru_A2191	0.60	+1.1
2,545,294	+		Rru_A2191	0.65	+0.3
2,545,294	+		Rru_A2191	0.65	+1.3
2,545,294	+		Rru_A2191	0.65	+1.3
2,545,294	+		Rru_A2191	0.65	-1.1
2,545,295	-		Rru_A2191	0.65	+0.5
2,545,295	-		Rru_A2191	0.65	+1.0
2,545,295	-		Rru_A2191	0.65	+0.1
2,545,354	+		Rru_A2191	0.68	+0.9
2,545,624	+		Rru_A2191	0.83	+1.1
2,545,624	+		Rru_A2191	0.83	+1.4
2,545,636	-		Rru_A2191	0.84	+0.6
2,545,902	+				-0.1
2,545,902	+				+1.5
2,545,902	+				+1.0
2,545,976	+				+1.0
2,545,976	+				+1.4
2,545,977	-				-0.6
2,545,977	-				+0.4
2,545,984	+				-1.1
2,545,985	-				-1.1
2,546,147	+				+0.6
2,546,147	+				-0.1
2,546,147	+				-0.1
2,546,147	+				-0.1
2,546,147	+				-0.6
2,546,147	+				-0.4
2,546,225	+				+0.2
2,546,321	+		Rru_A2192	0.13	+0.9
2,546,322	-		Rru_A2192	0.13	-0.1
2,546,322	-		Rru_A2192	0.13	-0.1
2,546,439	+		Rru_A2192	0.20	-1.1
2,546,439	+		Rru_A2192	0.20	+1.0
2,546,439	+		Rru_A2192	0.20	-0.1
2,546,446	+		Rru_A2192	0.20	+1.7
2,546,447	-		Rru_A2192	0.20	-0.1
2,546,783	-		Rru_A2192	0.39	-0.1
2,546,912	+		Rru_A2192	0.46	-0.1
2,546,912	+		Rru_A2192	0.46	+0.9
2,546,912	+		Rru_A2192	0.46	-0.1
2,546,913	-		Rru_A2192	0.46	-3.1
2,546,913	-		Rru_A2192	0.46	+0.5
2,546,913	-		Rru_A2192	0.46	-0.1
2,546,913	-		Rru_A2192	0.46	-0.1
2,546,913	-		Rru_A2192	0.46	-0.7
2,546,913	-		Rru_A2192	0.46	-0.1
2,546,913	-		Rru_A2192	0.46	-1.1
2,546,913	-		Rru_A2192	0.46	-0.1
2,546,933	+		Rru_A2192	0.47	+0.1
2,546,934	-		Rru_A2192	0.48	+0.1
2,546,936	+		Rru_A2192	0.48	-0.1
2,546,936	+		Rru_A2192	0.48	-0.1
2,546,936	+		Rru_A2192	0.48	-1.0
2,546,937	-		Rru_A2192	0.48	-0.1
2,546,978	+		Rru_A2192	0.50	+0.2
2,546,978	+		Rru_A2192	0.50	-2.1
2,547,194	+		Rru_A2192	0.62	-0.1
2,547,194	+		Rru_A2192	0.62	+1.2
2,547,195	-		Rru_A2192	0.62	-0.1
2,547,195	-		Rru_A2192	0.62	-0.1
2,547,195	-		Rru_A2192	0.62	-0.1
2,547,195	-		Rru_A2192	0.62	-1.4
2,547,195	-		Rru_A2192	0.62	-0.1
2,547,608	+		Rru_A2192	0.85	+0.8
2,547,608	+		Rru_A2192	0.85	+0.9
2,547,608	+		Rru_A2192	0.85	-0.1
2,547,608	+		Rru_A2192	0.85	-0.1
2,547,608	+		Rru_A2192	0.85	-0.1
2,547,608	+		Rru_A2192	0.85	+0.5
2,547,608	+		Rru_A2192	0.85	-0.1
2,547,608	+		Rru_A2192	0.85	+0.5
2,547,608	+		Rru_A2192	0.85	+1.0
2,547,609	-		Rru_A2192	0.85	-0.1
2,547,609	-		Rru_A2192	0.85	-2.7
2,547,609	-		Rru_A2192	0.85	-0.1
2,547,609	-		Rru_A2192	0.85	-0.8
2,547,609	-		Rru_A2192	0.85	-1.5
2,547,609	-		Rru_A2192	0.85	-0.9
2,547,609	-		Rru_A2192	0.85	-0.9
2,547,609	-		Rru_A2192	0.85	-0.1
2,547,609	-		Rru_A2192	0.85	-1.4
2,547,609	-		Rru_A2192	0.85	-0.1
2,547,609	-		Rru_A2192	0.85	-1.1
2,547,609	-		Rru_A2192	0.85	-1.1
2,547,609	-		Rru_A2192	0.85	-1.3
2,547,611	-		Rru_A2192	0.85	-0.1
2,547,639	-		Rru_A2192	0.87	-0.1
2,547,639	-		Rru_A2192	0.87	-0.8
2,547,644	+		Rru_A2192	0.87	+1.7
2,547,644	+		Rru_A2192	0.87	+1.6
2,547,644	+		Rru_A2192	0.87	-0.1
2,547,645	-		Rru_A2192	0.87	-0.1
2,547,650	+		Rru_A2192	0.87	-0.1
2,547,728	+				-0.1
2,547,728	+				-0.1
2,547,729	-				-2.2
2,547,737	-				-0.1
2,547,949	+				+2.1
2,547,949	+				+1.4
2,547,949	+				+0.9
2,547,949	+				+1.5
2,547,949	+				-0.1
2,547,949	+				+1.2
2,547,950	-				-0.1
2,547,969	-				-0.1
2,547,981	+				+0.3
2,547,981	+				-0.1
2,547,982	-				+0.0
2,547,982	-				-1.1
2,547,982	-				-1.1
2,547,982	-				-1.1
2,547,989	+				+1.2
2,547,990	-				-1.1
2,548,036	+				-1.1
2,548,036	+				-0.1
2,548,036	+				-0.1
2,548,037	-				-1.1
2,548,077	-				-1.7
2,548,133	+				-0.1
2,548,133	+				-0.1
2,548,134	-				-1.5
2,548,134	-				-0.5
2,548,467	-		Rru_A2193	0.32	-1.1
2,548,608	-		Rru_A2193	0.42	-0.7
2,548,645	+		Rru_A2193	0.45	-0.1
2,548,645	+		Rru_A2193	0.45	-0.1
2,548,645	+		Rru_A2193	0.45	+0.2
2,548,645	+		Rru_A2193	0.45	-1.0
2,548,645	+		Rru_A2193	0.45	-0.1
2,548,645	+		Rru_A2193	0.45	-2.1
2,548,646	-		Rru_A2193	0.45	+1.3
2,548,646	-		Rru_A2193	0.45	+0.8
2,548,790	+		Rru_A2193	0.55	-0.9
2,548,792	+		Rru_A2193	0.56	+0.1
2,548,792	+		Rru_A2193	0.56	-0.8
2,548,792	+		Rru_A2193	0.56	-1.9
2,548,792	+		Rru_A2193	0.56	-0.2
2,548,792	+		Rru_A2193	0.56	-0.4
2,548,793	-		Rru_A2193	0.56	-1.5
2,548,793	-		Rru_A2193	0.56	-0.7
2,548,793	-		Rru_A2193	0.56	-1.8
2,548,795	+		Rru_A2193	0.56	-0.1
2,548,795	+		Rru_A2193	0.56	-0.4
2,548,796	-		Rru_A2193	0.56	-0.1
2,548,796	-		Rru_A2193	0.56	-0.1
2,548,796	-		Rru_A2193	0.56	-1.2
2,548,811	+		Rru_A2193	0.57	-0.2
2,548,811	+		Rru_A2193	0.57	-0.1
2,548,812	-		Rru_A2193	0.57	+0.5
2,548,812	-		Rru_A2193	0.57	-1.7
2,548,812	-		Rru_A2193	0.57	-1.1
2,548,823	+		Rru_A2193	0.58	-0.1
2,548,823	+		Rru_A2193	0.58	-0.1
2,548,823	+		Rru_A2193	0.58	-0.1
2,548,824	-		Rru_A2193	0.58	-0.1
2,548,824	-		Rru_A2193	0.58	-0.1
2,548,824	-		Rru_A2193	0.58	-0.1
2,548,824	-		Rru_A2193	0.58	-0.1
2,548,824	-		Rru_A2193	0.58	-1.1
2,548,824	-		Rru_A2193	0.58	-1.2
2,548,826	-		Rru_A2193	0.58	-0.3