Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2171

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,521,191	-				+1.1
2,521,211	+				+1.9
2,521,212	-				+1.3
2,521,275	-				+1.2
2,521,457	+		Rru_A2171	0.23	-0.1
2,521,457	+		Rru_A2171	0.23	+1.0
2,521,457	+		Rru_A2171	0.23	+1.1
2,521,458	-		Rru_A2171	0.23	+1.2
2,521,458	-		Rru_A2171	0.23	+1.7
2,521,496	+		Rru_A2171	0.27	+3.0
2,521,496	+		Rru_A2171	0.27	-0.1
2,521,496	+		Rru_A2171	0.27	-1.7
2,521,497	-		Rru_A2171	0.27	-0.1
2,521,497	-		Rru_A2171	0.27	+1.6
2,521,497	-		Rru_A2171	0.27	+1.2
2,521,497	-		Rru_A2171	0.27	-0.1
2,521,497	-		Rru_A2171	0.27	-0.1
2,521,497	-		Rru_A2171	0.27	-0.1
2,521,497	-		Rru_A2171	0.27	+1.1
2,521,497	-		Rru_A2171	0.27	+1.9
2,521,497	-		Rru_A2171	0.27	+1.0
2,521,533	+		Rru_A2171	0.30	+3.1
2,521,533	+		Rru_A2171	0.30	-0.1
2,521,534	-		Rru_A2171	0.30	-0.1
2,521,717	-		Rru_A2171	0.47	+2.0
2,521,860	+		Rru_A2171	0.60	+0.5
2,521,861	-		Rru_A2171	0.60	+1.3
2,521,873	-		Rru_A2171	0.61	+0.8
2,521,873	-		Rru_A2171	0.61	+1.5
2,521,875	+		Rru_A2171	0.61	+0.6
2,521,875	+		Rru_A2171	0.61	-0.1
2,521,876	-		Rru_A2171	0.61	-0.1
2,521,876	-		Rru_A2171	0.61	+0.7
2,521,876	-		Rru_A2171	0.61	+0.8
2,522,100	+		Rru_A2171	0.81	-0.1
2,522,101	-		Rru_A2171	0.81	+1.8
2,522,101	-		Rru_A2171	0.81	+1.5
2,522,103	+		Rru_A2171	0.81	+1.5
2,522,103	+		Rru_A2171	0.81	-1.1
2,522,103	+		Rru_A2171	0.81	+1.6
2,522,103	+		Rru_A2171	0.81	+1.5
2,522,103	+		Rru_A2171	0.81	-0.1
2,522,103	+		Rru_A2171	0.81	-0.3
2,522,104	-		Rru_A2171	0.81	-0.1
2,522,106	+		Rru_A2171	0.82	-0.1
2,522,106	+		Rru_A2171	0.82	+0.7
2,522,107	-		Rru_A2171	0.82	-0.1
2,522,107	-		Rru_A2171	0.82	+1.2
2,522,107	-		Rru_A2171	0.82	+1.0
2,522,109	+		Rru_A2171	0.82	+1.0
2,522,109	+		Rru_A2171	0.82	+0.8
2,522,110	-		Rru_A2171	0.82	-0.1
2,522,110	-		Rru_A2171	0.82	-0.1
2,522,110	-		Rru_A2171	0.82	-0.1
2,522,110	-		Rru_A2171	0.82	-0.1
2,522,195	+		Rru_A2171	0.90	+1.4
2,522,195	+		Rru_A2171	0.90	+1.1
2,522,196	-		Rru_A2171	0.90	+1.5
2,522,196	-		Rru_A2171	0.90	+1.0
2,522,269	-				-1.1
2,522,269	-				-0.1
2,522,307	+				+1.3
2,522,307	+				+0.9
2,522,308	-				-0.1
2,522,308	-				-0.1
2,522,324	+				+1.2
2,522,325	-				+0.6
2,522,373	+				-0.1
2,522,374	-				-0.1
2,522,509	-		Rru_A2172	0.12	-0.1
2,522,510	+		Rru_A2172	0.12	+0.7
2,522,510	+		Rru_A2172	0.12	+0.9
2,522,510	+		Rru_A2172	0.12	+1.9
2,522,510	+		Rru_A2172	0.12	-1.1
2,522,511	-		Rru_A2172	0.12	-0.1
2,522,511	-		Rru_A2172	0.12	+1.3
2,522,511	-		Rru_A2172	0.12	+1.9
2,522,511	-		Rru_A2172	0.12	+0.9
2,522,511	-		Rru_A2172	0.12	+1.7
2,522,511	-		Rru_A2172	0.12	-0.1
2,522,511	-		Rru_A2172	0.12	+0.8
2,522,669	+		Rru_A2172	0.28	-0.1
2,522,669	+		Rru_A2172	0.28	+0.9
2,522,670	-		Rru_A2172	0.28	-0.1
2,522,670	-		Rru_A2172	0.28	-0.1
2,522,711	+		Rru_A2172	0.32	-0.1
2,522,711	+		Rru_A2172	0.32	+1.0
2,522,711	+		Rru_A2172	0.32	-0.8
2,522,711	+		Rru_A2172	0.32	+1.9
2,522,711	+		Rru_A2172	0.32	+1.0
2,522,712	-		Rru_A2172	0.32	-2.1
2,522,712	-		Rru_A2172	0.32	+1.0
2,522,712	-		Rru_A2172	0.32	+2.0
2,522,840	+		Rru_A2172	0.44	-0.1
2,522,843	+		Rru_A2172	0.44	+1.4
2,522,843	+		Rru_A2172	0.44	-1.1
2,522,844	-		Rru_A2172	0.44	+1.3
2,522,844	-		Rru_A2172	0.44	+0.5
2,522,844	-		Rru_A2172	0.44	+2.1
2,522,844	-		Rru_A2172	0.44	-0.1
2,522,844	-		Rru_A2172	0.44	+0.9
2,522,844	-		Rru_A2172	0.44	+1.3
2,522,907	+		Rru_A2172	0.50	-0.1
2,522,954	+		Rru_A2172	0.55	+1.4
2,523,029	-		Rru_A2172	0.62	-0.1
2,523,029	-		Rru_A2172	0.62	+0.7
2,523,029	-		Rru_A2172	0.62	-0.1
2,523,029	-		Rru_A2172	0.62	-0.1
2,523,110	+		Rru_A2172	0.70	+1.3
2,523,110	+		Rru_A2172	0.70	+1.2
2,523,120	-		Rru_A2172	0.71	+2.6
2,523,213	+		Rru_A2172	0.80	-0.1
2,523,213	+		Rru_A2172	0.80	+1.5