Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2155
Experiment: Succinic Acid; Light intensity 9 uM
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Succinic Acid; Light intensity 9 uM |
---|---|---|---|---|---|
remove | |||||
2,501,849 | - | Rru_A2153 | 0.56 | +0.7 | |
2,502,338 | + | Rru_A2154 | 0.26 | -0.1 | |
2,502,365 | + | Rru_A2154 | 0.32 | -0.1 | |
2,502,365 | + | Rru_A2154 | 0.32 | +0.6 | |
2,502,365 | + | Rru_A2154 | 0.32 | +1.0 | |
2,502,366 | - | Rru_A2154 | 0.32 | -0.1 | |
2,502,366 | - | Rru_A2154 | 0.32 | -0.1 | |
2,503,090 | + | Rru_A2155 | 0.46 | -0.1 | |
2,503,090 | + | Rru_A2155 | 0.46 | -2.4 | |
2,503,090 | + | Rru_A2155 | 0.46 | +0.1 | |
2,503,090 | + | Rru_A2155 | 0.46 | -0.1 | |
2,503,091 | - | Rru_A2155 | 0.46 | -0.1 | |
2,503,091 | - | Rru_A2155 | 0.46 | +0.9 | |
2,503,091 | - | Rru_A2155 | 0.46 | +0.8 | |
2,503,566 | - | -0.1 | |||
2,503,642 | + | +1.5 | |||
2,503,642 | + | -0.1 | |||
2,503,643 | - | +0.3 | |||
2,503,710 | - | +0.6 | |||
2,503,732 | + | +0.7 | |||
2,503,732 | + | -0.1 | |||
2,503,733 | - | -1.1 | |||
2,503,733 | - | -0.1 | |||
2,503,762 | + | +0.7 | |||
2,503,766 | - | +1.8 | |||
2,503,768 | + | +1.3 |
Or see this region's nucleotide sequence