Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2143

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,486,968	+		Rru_A2142	0.52	+1.5
2,486,968	+		Rru_A2142	0.52	+1.2
2,486,968	+		Rru_A2142	0.52	+1.7
2,486,969	-		Rru_A2142	0.52	-0.1
2,486,969	-		Rru_A2142	0.52	+0.9
2,486,969	-		Rru_A2142	0.52	-0.1
2,487,792	+				+1.2
2,487,793	-				-0.1
2,487,802	+				+0.6
2,487,803	-				-0.1
2,487,803	-				+0.2
2,487,805	-				-0.1
2,487,919	-		Rru_A2143	0.22	+1.5
2,487,966	+		Rru_A2143	0.28	-0.1
2,487,966	+		Rru_A2143	0.28	-0.1
2,487,966	+		Rru_A2143	0.28	+0.9
2,487,967	-		Rru_A2143	0.28	+0.8
2,488,077	+		Rru_A2143	0.43	+1.0
2,488,078	-		Rru_A2143	0.43	+0.6
2,488,078	-		Rru_A2143	0.43	+0.5
2,488,633	+				+1.0
2,488,633	+				-0.1
2,488,633	+				-0.1
2,488,633	+				-1.7
2,488,633	+				+1.0
2,488,633	+				+0.8
2,488,633	+				+1.0
2,488,634	-				-0.1
2,488,634	-				-0.1
2,488,634	-				+0.9
2,488,634	-				-0.1
2,488,634	-				-0.1
2,488,634	-				+1.1
2,488,634	-				+0.5
2,488,634	-				-0.1
2,488,864	+		Rru_A2144	0.88	-0.1
2,488,865	-		Rru_A2144	0.88	-0.1
2,488,908	-				+1.0
2,489,067	+				+1.4
2,489,067	+				+0.7
2,489,068	-				+0.7