Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2111

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,448,743	+				-0.1
2,448,744	-				-0.1
2,448,744	-				-0.1
2,448,744	-				+1.1
2,448,802	-				-0.1
2,448,828	+				-0.1
2,448,829	-				-0.1
2,448,962	+				-0.1
2,448,963	-				-0.1
2,448,963	-				+0.6
2,449,053	+				-0.1
2,449,053	+				-0.1
2,449,054	-				+0.5
2,449,140	+		Rru_A2110	0.21	+3.2
2,449,140	+		Rru_A2110	0.21	-1.1
2,449,140	+		Rru_A2110	0.21	+1.4
2,449,140	+		Rru_A2110	0.21	+1.0
2,449,141	-		Rru_A2110	0.21	-0.1
2,449,141	-		Rru_A2110	0.21	-0.1
2,449,144	+		Rru_A2110	0.22	-0.1
2,449,145	-		Rru_A2110	0.22	-0.1
2,449,145	-		Rru_A2110	0.22	+0.2
2,449,145	-		Rru_A2110	0.22	-1.7
2,449,147	-		Rru_A2110	0.23	-0.1
2,449,147	-		Rru_A2110	0.23	-0.8
2,449,193	-		Rru_A2110	0.34	-1.1
2,449,264	-		Rru_A2110	0.51	-0.1
2,449,264	-		Rru_A2110	0.51	-1.1
2,449,264	-		Rru_A2110	0.51	+0.5
2,449,288	+		Rru_A2110	0.57	+1.9
2,449,290	+		Rru_A2110	0.57	+1.8
2,449,290	+		Rru_A2110	0.57	-0.1
2,449,466	-				-0.1
2,449,490	+				-0.1
2,449,490	+				-1.1
2,449,490	+				+0.4
2,449,491	-				-0.1
2,449,491	-				-0.2
2,449,491	-				-0.3
2,450,224	+		Rru_A2111	0.60	+0.6
2,450,224	+		Rru_A2111	0.60	-0.1
2,450,225	-		Rru_A2111	0.60	+0.9
2,450,225	-		Rru_A2111	0.60	-0.0
2,450,676	+				-0.1
2,450,678	+				+1.3
2,450,679	-				-0.1
2,450,681	+				+1.4
2,450,994	+		Rru_A2112	0.27	+1.0
2,451,063	+		Rru_A2112	0.36	+0.8
2,451,063	+		Rru_A2112	0.36	+0.6
2,451,064	-		Rru_A2112	0.36	+1.0
2,451,064	-		Rru_A2112	0.36	+1.8
2,451,236	+		Rru_A2112	0.61	-0.1
2,451,237	-		Rru_A2112	0.61	-0.1
2,451,237	-		Rru_A2112	0.61	+1.1
2,451,353	-		Rru_A2112	0.77	+1.0
2,451,411	+		Rru_A2112	0.85	-0.1
2,451,411	+		Rru_A2112	0.85	+1.9