Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2103

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,437,002	-		Rru_A2101	0.88	+0.2
2,437,002	-		Rru_A2101	0.88	+0.2
2,437,120	+				+0.9
2,437,120	+				-0.1
2,437,120	+				+0.5
2,437,120	+				-0.1
2,437,120	+				+1.2
2,437,120	+				-4.2
2,437,121	-				+1.0
2,437,121	-				+1.0
2,437,169	+				-0.2
2,437,217	+				+1.3
2,437,240	-				-2.1
2,437,240	-				+1.2
2,437,262	+				+0.8
2,437,290	+				+0.9
2,437,290	+				+1.5
2,437,291	-				-0.1
2,437,319	+				-0.1
2,437,319	+				+2.0
2,437,677	+				-0.1
2,437,678	-				+0.9
2,437,678	-				-0.1
2,437,678	-				-0.1
2,437,767	-				-0.1
2,437,806	+				+1.0
2,437,900	+				+0.1
2,437,918	+		Rru_A2103	0.10	-0.1
2,437,995	-		Rru_A2103	0.17	-0.1
2,438,214	+		Rru_A2103	0.37	+1.0
2,438,214	+		Rru_A2103	0.37	+3.1
2,438,215	-		Rru_A2103	0.37	-0.9
2,438,215	-		Rru_A2103	0.37	+0.5
2,438,223	+		Rru_A2103	0.37	+1.0
2,438,223	+		Rru_A2103	0.37	+0.1
2,438,223	+		Rru_A2103	0.37	+1.1
2,438,223	+		Rru_A2103	0.37	+1.6
2,438,224	-		Rru_A2103	0.37	-0.1
2,438,224	-		Rru_A2103	0.37	+0.7
2,438,224	-		Rru_A2103	0.37	+1.3
2,438,224	-		Rru_A2103	0.37	+0.5
2,438,226	+		Rru_A2103	0.38	+0.3
2,438,226	+		Rru_A2103	0.38	-0.1
2,438,227	-		Rru_A2103	0.38	-0.1
2,438,325	+		Rru_A2103	0.46	+1.2
2,438,326	-		Rru_A2103	0.47	+1.2
2,438,326	-		Rru_A2103	0.47	+2.2
2,438,326	-		Rru_A2103	0.47	-0.1
2,438,340	+		Rru_A2103	0.48	+1.4
2,438,340	+		Rru_A2103	0.48	-0.1
2,438,496	+		Rru_A2103	0.62	+1.0
2,438,496	+		Rru_A2103	0.62	-0.1
2,438,496	+		Rru_A2103	0.62	+0.5
2,438,496	+		Rru_A2103	0.62	+0.4
2,438,497	-		Rru_A2103	0.62	+0.7
2,438,497	-		Rru_A2103	0.62	-0.1
2,438,497	-		Rru_A2103	0.62	+0.8
2,438,497	-		Rru_A2103	0.62	+0.9
2,438,497	-		Rru_A2103	0.62	-0.1
2,438,497	-		Rru_A2103	0.62	+0.9
2,438,497	-		Rru_A2103	0.62	-0.1
2,438,745	+		Rru_A2103	0.84	+0.5
2,438,745	+		Rru_A2103	0.84	-0.1
2,438,746	-		Rru_A2103	0.84	+2.5
2,438,746	-		Rru_A2103	0.84	+0.0
2,438,871	-				+0.4
2,438,872	+				+1.2
2,438,872	+				+1.2
2,438,872	+				+1.1
2,438,872	+				-1.1
2,438,872	+				-0.1
2,438,872	+				-2.1
2,438,873	-				+1.1
2,438,873	-				+0.9
2,438,873	-				+0.3
2,438,873	-				-0.1
2,438,873	-				+1.1
2,438,873	-				-1.1
2,438,874	+				-0.1
2,438,874	+				+2.0
2,438,874	+				-0.1
2,438,874	+				-0.1
2,438,874	+				+0.7
2,438,874	+				-0.1
2,438,874	+				-0.1
2,438,874	+				+0.7
2,438,874	+				+0.7
2,438,874	+				+0.9
2,438,874	+				+0.9
2,438,875	-				+1.7
2,438,875	-				+0.6
2,438,875	-				+1.4
2,438,875	-				-0.1
2,438,943	+				-0.1
2,438,944	-				+1.3
2,439,865	+		Rru_A2105	0.13	-0.1
2,439,865	+		Rru_A2105	0.13	+0.7
2,439,865	+		Rru_A2105	0.13	+0.8