Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2044

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,363,361	+		Rru_A2043	0.32	+1.5
2,363,886	+		Rru_A2043	0.83	+2.1
2,363,895	-		Rru_A2043	0.84	-0.1
2,363,895	-		Rru_A2043	0.84	+0.9
2,363,895	-		Rru_A2043	0.84	+0.5
2,363,950	+		Rru_A2043	0.89	+2.3
2,364,019	+				+1.1
2,364,020	-				+0.6
2,364,020	-				+0.8
2,364,020	-				+1.0
2,364,020	-				-0.1
2,364,020	-				+0.9
2,364,020	-				+1.0
2,364,021	+				+2.4
2,364,021	+				-0.1
2,364,021	+				+2.1
2,364,021	+				-0.1
2,364,021	+				+1.1
2,364,021	+				+0.5
2,364,022	-				-0.1
2,364,022	-				+1.4
2,364,022	-				-0.1
2,364,022	-				+1.0
2,364,043	+				-1.1
2,364,043	+				-0.1
2,364,043	+				+1.2
2,364,043	+				+0.3
2,364,043	+				+0.5
2,364,044	-				+1.0
2,364,044	-				-0.1
2,364,189	+				-1.1
2,364,189	+				+1.4
2,364,189	+				-0.1
2,364,190	-				-0.1
2,364,190	-				+1.3
2,364,190	-				-0.1
2,364,191	+				+1.2
2,364,191	+				+1.8
2,364,191	+				+0.1
2,364,191	+				+1.3
2,364,192	-				-0.1
2,364,192	-				+1.5
2,364,193	+				+1.1
2,364,193	+				+1.2
2,364,194	-				+1.0
2,364,194	-				+2.0
2,364,194	-				+1.5
2,364,348	+				+0.1
2,364,348	+				-0.1
2,364,349	-				-0.1
2,364,429	+		Rru_A2044	0.25	+0.8
2,364,430	-		Rru_A2044	0.25	+0.4
2,364,430	-		Rru_A2044	0.25	-0.1
2,364,462	+		Rru_A2044	0.33	-0.1
2,364,462	+		Rru_A2044	0.33	+1.1
2,364,463	-		Rru_A2044	0.33	+1.1
2,364,463	-		Rru_A2044	0.33	-0.1
2,364,577	+		Rru_A2044	0.59	-1.1
2,364,577	+		Rru_A2044	0.59	-0.1
2,364,578	-		Rru_A2044	0.59	+1.0
2,364,578	-		Rru_A2044	0.59	+0.9
2,364,631	+		Rru_A2044	0.71	-0.1
2,364,631	+		Rru_A2044	0.71	-0.1
2,364,631	+		Rru_A2044	0.71	+0.4
2,364,632	-		Rru_A2044	0.72	+1.6
2,364,632	-		Rru_A2044	0.72	+1.0
2,364,632	-		Rru_A2044	0.72	+0.8
2,364,632	-		Rru_A2044	0.72	-0.1
2,364,632	-		Rru_A2044	0.72	+1.2
2,364,651	+		Rru_A2044	0.76	-0.1
2,364,652	-		Rru_A2044	0.76	+1.1
2,364,652	-		Rru_A2044	0.76	-0.1
2,365,133	-		Rru_A2045	0.34	+0.9
2,365,133	-		Rru_A2045	0.34	-0.1
2,365,133	-		Rru_A2045	0.34	-1.1
2,365,236	+		Rru_A2045	0.47	-0.5
2,365,259	+		Rru_A2045	0.49	-1.1
2,365,259	+		Rru_A2045	0.49	+0.9
2,365,260	-		Rru_A2045	0.50	-0.1
2,365,260	-		Rru_A2045	0.50	-0.1
2,365,295	+		Rru_A2045	0.54	+0.7
2,365,295	+		Rru_A2045	0.54	+0.7
2,365,295	+		Rru_A2045	0.54	-0.1
2,365,503	-		Rru_A2045	0.79	+0.5
2,365,503	-		Rru_A2045	0.79	-0.1
2,365,532	+		Rru_A2045	0.82	+1.2
2,365,533	-		Rru_A2045	0.82	+1.7
2,365,533	-		Rru_A2045	0.82	-0.1
2,365,668	+				-0.1
2,365,669	-				+1.6
2,365,669	-				-0.1
2,365,729	-				+0.5
2,365,729	-				-0.1