Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2042

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,361,487	+		Rru_A2041	0.48	+1.7
2,361,488	-		Rru_A2041	0.48	+1.4
2,361,488	-		Rru_A2041	0.48	+1.3
2,361,650	-		Rru_A2041	0.60	+2.2
2,361,650	-		Rru_A2041	0.60	+1.4
2,361,674	+		Rru_A2041	0.62	+1.6
2,361,674	+		Rru_A2041	0.62	+2.3
2,361,674	+		Rru_A2041	0.62	-0.1
2,361,675	-		Rru_A2041	0.62	-0.1
2,361,754	+		Rru_A2041	0.67	+2.0
2,361,814	+		Rru_A2041	0.72	+1.7
2,361,814	+		Rru_A2041	0.72	+1.5
2,361,814	+		Rru_A2041	0.72	-0.1
2,361,814	+		Rru_A2041	0.72	+1.2
2,361,815	-		Rru_A2041	0.72	+1.0
2,361,815	-		Rru_A2041	0.72	+2.1
2,362,057	+		Rru_A2041	0.90	+1.9
2,362,057	+		Rru_A2041	0.90	+1.6
2,362,058	-		Rru_A2041	0.90	+2.3
2,362,058	-		Rru_A2041	0.90	+1.4
2,362,145	+				+1.6
2,362,145	+				+1.7
2,362,146	-				+1.7
2,362,147	+				+1.7
2,362,147	+				+2.6
2,362,147	+				+1.8
2,362,148	-				-0.1
2,362,162	+				-0.1
2,362,162	+				+1.8
2,362,162	+				-0.1
2,362,162	+				-0.1
2,362,163	-				-0.1
2,362,163	-				+1.6
2,362,163	-				-0.1
2,362,163	-				+2.2
2,362,348	+				-1.1
2,362,349	-				-0.1
2,362,349	-				-0.1
2,362,361	+				+0.8
2,362,370	+				+1.7
2,362,370	+				-0.5
2,362,370	+				+0.8
2,362,785	+		Rru_A2042	0.61	-1.1
2,362,785	+		Rru_A2042	0.61	+0.7
2,362,786	-		Rru_A2042	0.61	+1.0
2,362,786	-		Rru_A2042	0.61	-0.1
2,362,786	-		Rru_A2042	0.61	-1.1
2,362,880	+		Rru_A2042	0.78	+0.5
2,362,890	+		Rru_A2042	0.79	+0.4
2,362,891	-		Rru_A2042	0.80	-0.1
2,362,914	+		Rru_A2042	0.84	-0.1
2,362,914	+		Rru_A2042	0.84	+1.7
2,362,914	+		Rru_A2042	0.84	+1.6
2,362,915	-		Rru_A2042	0.84	-0.1
2,362,999	-				+0.8
2,363,004	+				+1.3
2,363,004	+				-0.1
2,363,017	+				+1.3
2,363,017	+				+0.1
2,363,018	-				-0.1
2,363,023	+				+0.7
2,363,024	-				+0.8
2,363,221	+		Rru_A2043	0.19	-0.1
2,363,221	+		Rru_A2043	0.19	+2.4
2,363,221	+		Rru_A2043	0.19	+0.8
2,363,222	-		Rru_A2043	0.19	+0.4
2,363,361	+		Rru_A2043	0.32	+1.5
2,363,886	+		Rru_A2043	0.83	+2.1
2,363,895	-		Rru_A2043	0.84	-0.1
2,363,895	-		Rru_A2043	0.84	+0.9
2,363,895	-		Rru_A2043	0.84	+0.5
2,363,950	+		Rru_A2043	0.89	+2.3