Strain Fitness in Rhodospirillum rubrum S1H around Rru_A2011

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,323,963	+		Rru_A2010	0.36	-0.1
2,323,963	+		Rru_A2010	0.36	-0.1
2,323,963	+		Rru_A2010	0.36	+0.1
2,323,963	+		Rru_A2010	0.36	+0.8
2,323,963	+		Rru_A2010	0.36	+1.8
2,323,964	-		Rru_A2010	0.36	+1.0
2,323,964	-		Rru_A2010	0.36	-0.1
2,323,964	-		Rru_A2010	0.36	-0.1
2,324,443	+		Rru_A2010	0.77	-0.1
2,324,443	+		Rru_A2010	0.77	-0.1
2,324,593	+		Rru_A2010	0.90	-0.1
2,324,593	+		Rru_A2010	0.90	-0.1
2,324,593	+		Rru_A2010	0.90	-0.1
2,324,593	+		Rru_A2010	0.90	+0.6
2,324,593	+		Rru_A2010	0.90	-0.1
2,324,623	+				+1.1
2,324,624	-				-1.1
2,324,624	-				-1.1
2,324,624	-				+1.4
2,324,724	-				+0.9
2,324,724	-				+2.2
2,324,724	-				+0.5
2,324,724	-				+1.7
2,324,826	+				-0.1
2,324,827	-				+0.0
2,324,828	+				-0.0
2,324,829	-				+1.4
2,324,904	+		Rru_A2011	0.11	-0.1
2,324,904	+		Rru_A2011	0.11	+0.5
2,325,270	-		Rru_A2011	0.33	+1.0
2,325,337	+		Rru_A2011	0.37	-0.1
2,325,337	+		Rru_A2011	0.37	+1.7
2,325,338	-		Rru_A2011	0.37	+1.6
2,325,530	+		Rru_A2011	0.48	-0.1
2,325,530	+		Rru_A2011	0.48	+1.2
2,325,531	-		Rru_A2011	0.48	-0.1
2,325,531	-		Rru_A2011	0.48	-0.1
2,325,542	-		Rru_A2011	0.49	+0.7
2,325,630	+		Rru_A2011	0.54	-0.1
2,325,632	+		Rru_A2011	0.54	-1.1
2,325,633	-		Rru_A2011	0.54	+1.2
2,325,633	-		Rru_A2011	0.54	+1.0
2,325,633	-		Rru_A2011	0.54	+0.9
2,326,059	+		Rru_A2011	0.79	+1.1
2,326,059	+		Rru_A2011	0.79	+0.8
2,326,060	-		Rru_A2011	0.80	-0.1
2,326,060	-		Rru_A2011	0.80	+0.8
2,326,072	-		Rru_A2011	0.80	-0.1
2,326,072	-		Rru_A2011	0.80	-0.1
2,326,072	-		Rru_A2011	0.80	+0.5
2,326,336	-				+1.0
2,326,507	+		Rru_A2012	0.13	-0.1
2,326,507	+		Rru_A2012	0.13	+1.6
2,326,507	+		Rru_A2012	0.13	-0.1
2,326,507	+		Rru_A2012	0.13	-0.1
2,326,507	+		Rru_A2012	0.13	+1.4
2,326,508	-		Rru_A2012	0.13	-0.1
2,326,508	-		Rru_A2012	0.13	+0.7
2,326,639	+		Rru_A2012	0.29	+0.5
2,326,773	-		Rru_A2012	0.45	+0.3
2,326,927	+		Rru_A2012	0.63	+0.5
2,326,928	-		Rru_A2012	0.63	-0.1
2,326,928	-		Rru_A2012	0.63	-0.1
2,326,931	-		Rru_A2012	0.64	-0.1
2,326,931	-		Rru_A2012	0.64	-0.3
2,327,212	+				+1.1
2,327,276	+				+0.1
2,327,276	+				+1.4
2,327,277	-				-0.1
2,327,277	-				+0.4
2,327,277	-				+0.1
2,327,277	-				+0.7
2,327,277	-				-0.1
2,327,277	-				+1.7
2,327,277	-				-0.1
2,327,277	-				+1.3
2,327,346	+		Rru_A2013	0.11	+1.5
2,327,375	+		Rru_A2013	0.14	+1.1
2,327,375	+		Rru_A2013	0.14	-0.1