Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1937

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,243,787	+		Rru_A1936	0.62	+1.1
2,243,911	+		Rru_A1936	0.69	+1.3
2,244,171	+		Rru_A1936	0.83	+0.6
2,244,172	-		Rru_A1936	0.83	-0.1
2,244,172	-		Rru_A1936	0.83	+1.1
2,244,172	-		Rru_A1936	0.83	+1.7
2,244,288	+		Rru_A1936	0.90	+0.9
2,244,289	-		Rru_A1936	0.90	-0.1
2,244,289	-		Rru_A1936	0.90	+1.6
2,244,289	-		Rru_A1936	0.90	-0.1
2,244,469	+				-0.1
2,244,564	-				+0.5
2,244,564	-				-0.1
2,244,564	-				-0.1
2,244,628	+				+1.0
2,244,628	+				+0.8
2,244,629	-				+1.0
2,244,630	+				-1.1
2,244,630	+				+0.9
2,244,630	+				+1.0
2,244,631	-				+1.5
2,244,631	-				-0.1
2,244,631	-				+1.0
2,244,631	-				-0.1
2,244,631	-				+1.6
2,245,591	-		Rru_A1937	0.69	-0.3
2,245,900	-				+0.7
2,246,036	+				-0.1
2,246,036	+				+0.7
2,246,037	-				-0.1
2,246,037	-				-0.1
2,246,037	-				-1.1
2,246,049	-				+0.9
2,246,049	-				-0.1
2,246,084	-				-1.1
2,246,084	-				-0.1
2,246,084	-				+1.1
2,246,084	-				+2.1
2,246,267	+		Rru_A1938	0.27	-0.5
2,246,409	+		Rru_A1938	0.44	+0.7
2,246,463	-		Rru_A1938	0.50	+0.9
2,246,608	-		Rru_A1938	0.67	+0.9
2,246,608	-		Rru_A1938	0.67	-0.1
2,246,700	+		Rru_A1938	0.78	+1.0
2,246,701	-		Rru_A1938	0.78	+1.1
2,246,759	-		Rru_A1938	0.84	-1.1
2,246,911	+				+1.7
2,246,911	+				+0.9
2,246,912	-				-0.1
2,246,912	-				-0.1