Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1934

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,240,857	-				+1.7
2,240,909	-				+1.4
2,240,914	-				+1.0
2,241,059	-		Rru_A1934	0.17	+1.6
2,241,118	+		Rru_A1934	0.27	+1.1
2,241,118	+		Rru_A1934	0.27	+1.6
2,241,119	-		Rru_A1934	0.27	+1.4
2,241,119	-		Rru_A1934	0.27	-0.1
2,241,121	+		Rru_A1934	0.27	+1.5
2,241,121	+		Rru_A1934	0.27	-0.1
2,241,121	+		Rru_A1934	0.27	-0.1
2,241,121	+		Rru_A1934	0.27	+0.7
2,241,121	+		Rru_A1934	0.27	-0.1
2,241,121	+		Rru_A1934	0.27	-0.1
2,241,121	+		Rru_A1934	0.27	+1.3
2,241,121	+		Rru_A1934	0.27	+1.5
2,241,121	+		Rru_A1934	0.27	+1.4
2,241,121	+		Rru_A1934	0.27	+0.9
2,241,122	-		Rru_A1934	0.27	+0.9
2,241,122	-		Rru_A1934	0.27	+1.6
2,241,122	-		Rru_A1934	0.27	+1.9
2,241,122	-		Rru_A1934	0.27	-1.1
2,241,124	+		Rru_A1934	0.28	-0.1
2,241,124	+		Rru_A1934	0.28	+1.1
2,241,124	+		Rru_A1934	0.28	+1.2
2,241,124	+		Rru_A1934	0.28	-0.1
2,241,124	+		Rru_A1934	0.28	+1.0
2,241,124	+		Rru_A1934	0.28	-0.0
2,241,124	+		Rru_A1934	0.28	-0.1
2,241,124	+		Rru_A1934	0.28	+1.2
2,241,124	+		Rru_A1934	0.28	+1.4
2,241,124	+		Rru_A1934	0.28	+2.9
2,241,124	+		Rru_A1934	0.28	-0.1
2,241,125	-		Rru_A1934	0.28	-1.1
2,241,125	-		Rru_A1934	0.28	+1.4
2,241,256	+		Rru_A1934	0.49	+1.1
2,241,257	-		Rru_A1934	0.49	-0.1
2,241,257	-		Rru_A1934	0.49	+1.4
2,241,257	-		Rru_A1934	0.49	-1.1
2,241,257	-		Rru_A1934	0.49	+1.3
2,241,484	+		Rru_A1934	0.87	+1.2
2,241,484	+		Rru_A1934	0.87	+1.5
2,241,485	-		Rru_A1934	0.87	+1.8
2,241,485	-		Rru_A1934	0.87	+1.6
2,241,485	-		Rru_A1934	0.87	-0.1
2,241,485	-		Rru_A1934	0.87	+1.5
2,241,485	-		Rru_A1934	0.87	-0.1
2,241,485	-		Rru_A1934	0.87	+0.8
2,241,526	+				+0.3
2,241,526	+				+1.2
2,241,670	+				-0.1
2,241,670	+				-0.1
2,241,670	+				+1.6
2,241,671	-				+2.1
2,241,671	-				+1.7
2,241,792	+		Rru_A1935	0.18	+0.4
2,241,793	-		Rru_A1935	0.18	+1.2
2,241,793	-		Rru_A1935	0.18	+1.2
2,241,793	-		Rru_A1935	0.18	-0.1
2,241,793	-		Rru_A1935	0.18	+1.1
2,241,793	-		Rru_A1935	0.18	+0.7
2,241,993	+		Rru_A1935	0.45	-0.1
2,241,994	-		Rru_A1935	0.45	-1.1
2,241,994	-		Rru_A1935	0.45	-0.1
2,241,994	-		Rru_A1935	0.45	+2.0
2,241,994	-		Rru_A1935	0.45	+0.9
2,241,995	+		Rru_A1935	0.45	-1.1
2,241,996	-		Rru_A1935	0.45	-0.1
2,242,264	-		Rru_A1935	0.80	-0.1
2,242,264	-		Rru_A1935	0.80	+0.7
2,242,264	-		Rru_A1935	0.80	+0.7
2,242,264	-		Rru_A1935	0.80	+0.9
2,242,283	+		Rru_A1935	0.82	+1.0
2,242,283	+		Rru_A1935	0.82	+1.6
2,242,283	+		Rru_A1935	0.82	-0.1
2,242,284	-		Rru_A1935	0.83	+1.5
2,242,284	-		Rru_A1935	0.83	-0.1
2,242,284	-		Rru_A1935	0.83	+0.6
2,242,317	+		Rru_A1935	0.87	-0.1
2,242,317	+		Rru_A1935	0.87	-3.6
2,242,317	+		Rru_A1935	0.87	-0.1
2,242,317	+		Rru_A1935	0.87	-0.1
2,242,317	+		Rru_A1935	0.87	-0.1
2,242,317	+		Rru_A1935	0.87	-0.1
2,242,318	-		Rru_A1935	0.87	-0.1
2,242,318	-		Rru_A1935	0.87	+0.5
2,242,318	-		Rru_A1935	0.87	-0.1
2,242,318	-		Rru_A1935	0.87	-0.1
2,242,318	-		Rru_A1935	0.87	-0.1
2,242,318	-		Rru_A1935	0.87	-1.1
2,242,318	-		Rru_A1935	0.87	-0.1
2,242,318	-		Rru_A1935	0.87	-0.1
2,242,319	+		Rru_A1935	0.87	+0.6
2,242,319	+		Rru_A1935	0.87	-0.1
2,242,319	+		Rru_A1935	0.87	+0.8
2,242,319	+		Rru_A1935	0.87	-1.1
2,242,319	+		Rru_A1935	0.87	+1.4
2,242,319	+		Rru_A1935	0.87	+1.3
2,242,319	+		Rru_A1935	0.87	-0.1
2,242,320	-		Rru_A1935	0.87	-0.1
2,242,320	-		Rru_A1935	0.87	+0.3
2,242,320	-		Rru_A1935	0.87	+0.7
2,242,320	-		Rru_A1935	0.87	+0.9
2,242,320	-		Rru_A1935	0.87	+1.1
2,242,373	+				+1.4
2,242,374	-				+0.8
2,242,374	-				+0.5
2,242,374	-				+1.2
2,242,556	+				+1.1