Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1868

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,164,370	+		Rru_A1866	0.81	-0.1
2,164,370	+		Rru_A1866	0.81	-0.1
2,164,371	-		Rru_A1866	0.81	+1.1
2,164,450	-		Rru_A1866	0.85	-0.1
2,164,473	+		Rru_A1866	0.86	+1.7
2,164,474	-		Rru_A1866	0.86	+1.2
2,164,533	-		Rru_A1866	0.89	-1.1
2,164,650	+				-0.1
2,164,650	+				+0.9
2,164,651	-				-0.1
2,164,651	-				+1.2
2,164,683	+				+0.7
2,164,756	-				-0.1
2,165,308	+		Rru_A1867	0.88	+0.6
2,165,425	+				+0.8
2,165,425	+				-0.1
2,165,426	-				-0.1
2,165,426	-				-0.1
2,165,456	+				-0.0
2,165,541	-		Rru_A1868	0.14	-0.1
2,165,581	+		Rru_A1868	0.17	+0.1
2,165,581	+		Rru_A1868	0.17	+0.5
2,165,581	+		Rru_A1868	0.17	-0.1
2,165,582	-		Rru_A1868	0.17	+0.4
2,165,602	+		Rru_A1868	0.18	+0.9
2,165,640	-		Rru_A1868	0.21	-0.1
2,165,732	-		Rru_A1868	0.28	+1.4
2,165,732	-		Rru_A1868	0.28	+0.9
2,166,241	+		Rru_A1868	0.64	+0.1
2,166,441	-		Rru_A1868	0.79	-0.1
2,166,441	-		Rru_A1868	0.79	+2.4
2,166,441	-		Rru_A1868	0.79	-0.1
2,166,442	+		Rru_A1868	0.79	-0.1
2,166,442	+		Rru_A1868	0.79	-0.1
2,166,443	-		Rru_A1868	0.79	-0.1
2,166,443	-		Rru_A1868	0.79	-0.1
2,166,470	+		Rru_A1868	0.81	-0.1
2,166,472	+		Rru_A1868	0.81	-0.1
2,166,473	-		Rru_A1868	0.81	+2.0
2,166,550	+		Rru_A1868	0.87	-0.1
2,166,550	+		Rru_A1868	0.87	-0.5
2,166,550	+		Rru_A1868	0.87	-0.1
2,166,551	-		Rru_A1868	0.87	-0.1
2,166,551	-		Rru_A1868	0.87	-0.1
2,166,551	-		Rru_A1868	0.87	+0.2
2,166,551	-		Rru_A1868	0.87	-0.1
2,166,551	-		Rru_A1868	0.87	+0.2
2,166,877	-				+1.3
2,166,905	-				-0.1
2,166,949	+				-0.1
2,166,986	+				-0.1
2,166,986	+				+0.7
2,166,986	+				+0.1
2,166,986	+				+0.7
2,166,986	+				-0.1
2,166,987	-				-0.1
2,167,557	-				+0.8
2,167,567	+				-0.1
2,167,567	+				+1.7
2,167,568	-				-1.1
2,167,580	+				-0.1
2,167,590	-				-0.1