Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1837

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,133,713	+		Rru_A1836	0.26	+0.9
2,133,713	+		Rru_A1836	0.26	-1.0
2,133,713	+		Rru_A1836	0.26	+0.6
2,133,714	-		Rru_A1836	0.26	+0.9
2,133,742	+		Rru_A1836	0.28	+1.1
2,133,743	-		Rru_A1836	0.28	+0.7
2,133,833	+		Rru_A1836	0.35	+0.6
2,133,833	+		Rru_A1836	0.35	-1.1
2,133,833	+		Rru_A1836	0.35	+0.6
2,133,833	+		Rru_A1836	0.35	-0.1
2,133,834	-		Rru_A1836	0.35	+1.2
2,133,834	-		Rru_A1836	0.35	-0.1
2,133,834	-		Rru_A1836	0.35	-0.1
2,133,834	-		Rru_A1836	0.35	-1.1
2,133,834	-		Rru_A1836	0.35	+0.4
2,134,004	+		Rru_A1836	0.48	+1.0
2,134,004	+		Rru_A1836	0.48	-0.1
2,134,004	+		Rru_A1836	0.48	-0.1
2,134,005	-		Rru_A1836	0.48	-0.1
2,134,005	-		Rru_A1836	0.48	+0.7
2,134,005	-		Rru_A1836	0.48	+0.9
2,134,115	+		Rru_A1836	0.57	-0.1
2,134,115	+		Rru_A1836	0.57	+1.7
2,134,116	-		Rru_A1836	0.57	+0.3
2,134,166	+		Rru_A1836	0.61	+0.5
2,134,167	-		Rru_A1836	0.61	+0.5
2,134,167	-		Rru_A1836	0.61	+0.6
2,134,167	-		Rru_A1836	0.61	+1.0
2,134,167	-		Rru_A1836	0.61	+0.6
2,134,167	-		Rru_A1836	0.61	-0.1
2,134,168	+		Rru_A1836	0.61	-0.1
2,134,168	+		Rru_A1836	0.61	+0.7
2,134,168	+		Rru_A1836	0.61	+1.1
2,134,169	-		Rru_A1836	0.61	+0.7
2,134,169	-		Rru_A1836	0.61	-0.1
2,134,169	-		Rru_A1836	0.61	-0.1
2,134,169	-		Rru_A1836	0.61	+0.4
2,134,484	+		Rru_A1836	0.85	-0.2
2,134,484	+		Rru_A1836	0.85	-0.1
2,134,484	+		Rru_A1836	0.85	+0.9
2,134,485	-		Rru_A1836	0.85	+1.1
2,134,485	-		Rru_A1836	0.85	+1.0
2,134,485	-		Rru_A1836	0.85	+0.9
2,134,485	-		Rru_A1836	0.85	-0.1
2,134,595	+				-0.1
2,134,596	-				-0.1
2,134,596	-				-0.1
2,134,596	-				-0.1
2,134,596	-				-0.3
2,134,596	-				+0.1
2,134,596	-				-0.5
2,134,596	-				+0.7
2,134,596	-				-0.1
2,134,596	-				-0.1
2,134,633	+				+0.1
2,134,633	+				+0.6
2,134,634	-				-1.5
2,134,634	-				-0.1
2,134,987	-		Rru_A1837	0.31	-0.1
2,135,016	+		Rru_A1837	0.34	-2.1
2,135,017	-		Rru_A1837	0.34	-0.1
2,135,284	+		Rru_A1837	0.61	-0.1
2,135,297	-		Rru_A1837	0.62	-1.1
2,135,300	-		Rru_A1837	0.62	-2.1
2,135,300	-		Rru_A1837	0.62	-0.1
2,135,359	+		Rru_A1837	0.68	-0.1
2,135,359	+		Rru_A1837	0.68	-0.1
2,135,360	-		Rru_A1837	0.68	-0.1
2,135,459	-		Rru_A1837	0.78	-0.1
2,135,530	+		Rru_A1837	0.85	-0.1
2,135,531	-		Rru_A1837	0.85	-0.1
2,135,639	-				-0.1
2,135,639	-				-0.1
2,135,767	+				-0.1
2,135,768	-				-1.1
2,136,044	+		Rru_A1838	0.31	+3.0
2,136,045	-		Rru_A1838	0.31	-0.1
2,136,140	+		Rru_A1838	0.42	+1.0
2,136,141	-		Rru_A1838	0.42	+0.6
2,136,141	-		Rru_A1838	0.42	-1.1
2,136,180	-		Rru_A1838	0.47	+0.6
2,136,188	+		Rru_A1838	0.48	+0.9
2,136,188	+		Rru_A1838	0.48	+0.8
2,136,188	+		Rru_A1838	0.48	-0.1
2,136,188	+		Rru_A1838	0.48	-0.1
2,136,189	-		Rru_A1838	0.48	+1.5
2,136,189	-		Rru_A1838	0.48	-0.1
2,136,189	-		Rru_A1838	0.48	+2.2
2,136,189	-		Rru_A1838	0.48	-0.1
2,136,375	-		Rru_A1838	0.70	+1.4
2,136,563	+				+0.7
2,136,563	+				+0.5
2,136,563	+				+0.9
2,136,563	+				+0.3
2,136,563	+				+0.7
2,136,564	-				+2.5
2,136,564	-				+0.2
2,136,564	-				-0.1
2,136,564	-				+1.6
2,136,564	-				-0.1
2,136,564	-				-0.1
2,136,649	+				-1.1
2,136,650	-				-1.7
2,136,650	-				-0.1
2,136,650	-				-0.7