Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1780

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
2,071,929	-				-0.1
2,071,929	-				-0.1
2,072,413	-		Rru_A1780	0.47	-0.1
2,072,414	+		Rru_A1780	0.47	+0.5
2,072,414	+		Rru_A1780	0.47	+1.4
2,072,414	+		Rru_A1780	0.47	-0.1
2,072,415	-		Rru_A1780	0.47	-0.1
2,072,415	-		Rru_A1780	0.47	-1.1
2,072,495	+		Rru_A1780	0.53	-0.1
2,072,495	+		Rru_A1780	0.53	-0.1
2,072,495	+		Rru_A1780	0.53	+1.3
2,072,496	-		Rru_A1780	0.54	+1.5
2,072,496	-		Rru_A1780	0.54	-0.1
2,072,619	-		Rru_A1780	0.64	-0.1
2,072,662	-		Rru_A1780	0.67	+0.8
2,072,678	+		Rru_A1780	0.69	-0.1
2,072,678	+		Rru_A1780	0.69	-1.1
2,072,678	+		Rru_A1780	0.69	+1.4
2,072,679	-		Rru_A1780	0.69	+1.1
2,072,830	-		Rru_A1780	0.81	-0.1
2,072,850	-		Rru_A1780	0.83	-0.1
2,072,888	+		Rru_A1780	0.86	+1.6
2,072,888	+		Rru_A1780	0.86	-0.1
2,072,888	+		Rru_A1780	0.86	+1.3
2,072,888	+		Rru_A1780	0.86	+2.0
2,072,888	+		Rru_A1780	0.86	+1.5
2,072,888	+		Rru_A1780	0.86	+2.2
2,072,888	+		Rru_A1780	0.86	+1.5
2,072,889	-		Rru_A1780	0.86	+1.5
2,072,889	-		Rru_A1780	0.86	+0.9
2,073,011	+				+2.2
2,073,012	-				-0.1
2,073,063	+				+2.1
2,073,159	+				-0.1
2,073,160	-				-1.7
2,073,163	+				+1.3
2,073,163	+				+1.2
2,073,163	+				-0.1
2,073,163	+				-1.1
2,073,164	-				-0.1
2,073,170	+				-0.1
2,073,171	-				-0.1
2,073,171	-				-0.1
2,073,172	+				-1.7
2,073,172	+				+1.5
2,073,172	+				+1.4
2,073,172	+				+0.5
2,073,173	-				+0.5
2,073,601	+				-0.1
2,073,601	+				-0.1
2,073,602	-				+0.9
2,073,602	-				+0.4
2,073,678	+				-0.1
2,073,679	-				+1.7
2,073,679	-				-0.1
2,073,701	-				-0.1
2,073,701	-				-0.1
2,073,797	+		Rru_A1782	0.19	+0.7
2,073,797	+		Rru_A1782	0.19	-0.1
2,073,798	-		Rru_A1782	0.20	-1.1
2,073,798	-		Rru_A1782	0.20	-0.1
2,073,798	-		Rru_A1782	0.20	-1.7
2,073,798	-		Rru_A1782	0.20	-0.1
2,073,931	-		Rru_A1782	0.48	-0.1
2,073,931	-		Rru_A1782	0.48	-0.1
2,073,931	-		Rru_A1782	0.48	+0.6