Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1685

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,975,792	-		Rru_A1683	0.52	-0.1
1,975,860	-		Rru_A1683	0.62	-0.1
1,976,071	+				-0.1
1,976,172	-				+1.2
1,976,213	+				+0.5
1,976,213	+				+1.0
1,976,213	+				+0.5
1,976,213	+				+1.0
1,976,290	+				-0.6
1,976,290	+				+1.3
1,976,328	+				-0.1
1,976,328	+				+0.5
1,976,845	+		Rru_A1685	0.12	-0.1
1,976,845	+		Rru_A1685	0.12	+0.8
1,976,845	+		Rru_A1685	0.12	+0.6
1,976,845	+		Rru_A1685	0.12	+1.7
1,976,845	+		Rru_A1685	0.12	-0.1
1,976,846	-		Rru_A1685	0.12	+1.9
1,976,846	-		Rru_A1685	0.12	+0.9
1,976,846	-		Rru_A1685	0.12	-0.1
1,976,846	-		Rru_A1685	0.12	+0.9
1,976,847	+		Rru_A1685	0.12	+0.9
1,976,847	+		Rru_A1685	0.12	+1.0
1,977,067	+		Rru_A1685	0.29	-0.1
1,977,068	-		Rru_A1685	0.29	+1.5
1,977,068	-		Rru_A1685	0.29	-0.1
1,977,068	-		Rru_A1685	0.29	+1.1
1,977,068	-		Rru_A1685	0.29	+0.8
1,977,293	-		Rru_A1685	0.47	+1.4
1,977,293	-		Rru_A1685	0.47	+0.2
1,977,293	-		Rru_A1685	0.47	+1.1
1,977,294	+		Rru_A1685	0.47	-0.1
1,977,294	+		Rru_A1685	0.47	-0.1
1,977,294	+		Rru_A1685	0.47	-0.1
1,977,841	+				-0.1
1,978,053	+				+0.9
1,978,067	-				-0.1
1,978,067	-				+1.4
1,978,081	-				+1.2
1,978,211	+				+0.6
1,978,212	-				+0.7
1,978,212	-				-0.0
1,978,373	+				-0.1
1,978,373	+				-0.1
1,978,374	-				+1.1
1,978,374	-				+0.7
1,978,374	-				-0.1
1,978,376	+				-0.1
1,978,448	+				+1.2
1,978,448	+				-0.1
1,978,449	-				-0.1
1,978,449	-				+0.8
1,978,449	-				+0.7
1,978,512	+				+0.4
1,978,579	-				+1.7
1,978,579	-				+0.5
1,978,581	+				-0.1
1,978,582	-				-0.1
1,978,767	+		Rru_A1686	0.56	+1.5
1,978,767	+		Rru_A1686	0.56	+0.5
1,978,767	+		Rru_A1686	0.56	-0.1
1,978,768	-		Rru_A1686	0.56	-1.1
1,978,768	-		Rru_A1686	0.56	-0.1
1,978,768	-		Rru_A1686	0.56	+1.0
1,978,842	+		Rru_A1686	0.83	-0.1
1,978,842	+		Rru_A1686	0.83	-1.1
1,978,842	+		Rru_A1686	0.83	-0.1
1,978,854	+		Rru_A1686	0.88	-1.1
1,978,854	+		Rru_A1686	0.88	-0.1
1,978,855	-		Rru_A1686	0.88	+0.8
1,978,855	-		Rru_A1686	0.88	+0.9
1,978,872	-				+1.4
1,978,872	-				+0.7
1,978,875	+				+1.6
1,978,875	+				-0.1
1,978,875	+				+1.4
1,978,875	+				+0.2
1,978,875	+				+0.4
1,978,875	+				-0.1
1,978,875	+				+0.8
1,978,875	+				-1.1
1,978,876	-				-0.1
1,978,876	-				-2.1
1,978,876	-				+1.3
1,978,876	-				-2.1
1,978,876	-				-1.1
1,978,941	+				+0.9
1,978,941	+				-0.1