Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1646

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,933,395	+				+0.7
1,933,395	+				+0.6
1,933,401	+				-0.2
1,933,401	+				-1.2
1,933,401	+				+0.4
1,933,470	-				-0.2
1,933,513	+				+0.4
1,933,514	-				+0.8
1,933,916	+		Rru_A1645	0.65	+1.0
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,916	+		Rru_A1645	0.65	+0.4
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,916	+		Rru_A1645	0.65	-1.2
1,933,916	+		Rru_A1645	0.65	-0.7
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,916	+		Rru_A1645	0.65	-0.2
1,933,917	-		Rru_A1645	0.65	+0.6
1,933,917	-		Rru_A1645	0.65	+0.5
1,933,917	-		Rru_A1645	0.65	+0.7
1,933,917	-		Rru_A1645	0.65	+2.0
1,933,917	-		Rru_A1645	0.65	+0.8
1,934,194	+				-0.1
1,934,194	+				-0.1
1,934,583	+		Rru_A1646	0.73	-0.1
1,934,583	+		Rru_A1646	0.73	+0.5
1,934,583	+		Rru_A1646	0.73	-0.1
1,934,583	+		Rru_A1646	0.73	-0.1
1,934,583	+		Rru_A1646	0.73	-0.1
1,934,585	+		Rru_A1646	0.74	-0.1
1,934,628	+		Rru_A1646	0.88	-1.0
1,934,628	+		Rru_A1646	0.88	+1.1
1,934,661	+				+1.6
1,934,801	+				+0.8
1,934,801	+				+1.4
1,934,802	-				-0.0
1,934,802	-				-0.1
1,934,802	-				+0.1
1,934,802	-				+2.3
1,934,806	+				-0.1
1,934,822	+				+1.6
1,934,822	+				-1.1
1,934,822	+				+2.7
1,934,822	+				-0.1
1,934,823	-				-1.1
1,934,832	+				-0.1
1,934,832	+				-0.1
1,934,833	-				-0.7
1,934,867	+				+0.8
1,934,868	-				-0.1
1,934,868	-				-0.1
1,934,913	+				-0.1
1,934,933	+				+1.4
1,934,934	-				+1.0
1,934,979	-				+1.2
1,934,981	+				-1.1
1,934,981	+				+1.3
1,934,981	+				-0.1
1,934,981	+				-0.1
1,934,982	-				+0.4
1,934,982	-				-0.1
1,934,982	-				-0.1
1,934,986	-				-0.1
1,934,986	-				-0.1
1,934,986	-				-0.1
1,934,987	+				+1.2
1,934,987	+				+1.2
1,934,987	+				-0.1
1,934,988	-				+1.4
1,934,988	-				-0.1
1,934,988	-				-0.1
1,935,099	+				+1.0
1,935,099	+				+0.7
1,935,100	-				+1.1
1,935,408	-				-0.1
1,935,595	+				+0.8
1,935,598	+		Rru_A1647	0.10	+1.1
1,935,598	+		Rru_A1647	0.10	-0.1
1,935,598	+		Rru_A1647	0.10	+1.1
1,935,599	-		Rru_A1647	0.10	+1.6
1,935,599	-		Rru_A1647	0.10	+1.1
1,935,640	+		Rru_A1647	0.11	+1.1
1,935,640	+		Rru_A1647	0.11	+0.6
1,935,641	-		Rru_A1647	0.11	-0.1
1,935,642	+		Rru_A1647	0.11	+1.0
1,935,642	+		Rru_A1647	0.11	+2.1
1,935,642	+		Rru_A1647	0.11	-0.1
1,935,642	+		Rru_A1647	0.11	+1.3
1,935,642	+		Rru_A1647	0.11	+0.9
1,935,642	+		Rru_A1647	0.11	-0.1
1,935,642	+		Rru_A1647	0.11	+0.0
1,935,662	+		Rru_A1647	0.11	+1.9
1,935,662	+		Rru_A1647	0.11	+1.1
1,935,663	-		Rru_A1647	0.11	+1.0
1,935,663	-		Rru_A1647	0.11	+1.2
1,935,663	-		Rru_A1647	0.11	+0.9
1,935,663	-		Rru_A1647	0.11	+1.2