Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1617

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,909,765	+		Rru_A1616	0.36	+1.0
1,909,765	+		Rru_A1616	0.36	-0.1
1,909,766	-		Rru_A1616	0.36	-0.1
1,909,766	-		Rru_A1616	0.36	-0.1
1,909,766	-		Rru_A1616	0.36	-0.1
1,909,766	-		Rru_A1616	0.36	-1.1
1,909,766	-		Rru_A1616	0.36	+1.8
1,909,766	-		Rru_A1616	0.36	-0.1
1,909,767	+		Rru_A1616	0.36	-0.1
1,909,768	-		Rru_A1616	0.36	+2.1
1,909,768	-		Rru_A1616	0.36	+2.2
1,909,954	+		Rru_A1616	0.55	+1.1
1,910,019	+		Rru_A1616	0.61	-0.1
1,910,020	-		Rru_A1616	0.61	-0.1
1,910,020	-		Rru_A1616	0.61	+1.7
1,910,020	-		Rru_A1616	0.61	-0.1
1,910,020	-		Rru_A1616	0.61	+1.1
1,910,020	-		Rru_A1616	0.61	-1.1
1,910,035	+		Rru_A1616	0.63	+1.4
1,910,036	-		Rru_A1616	0.63	-0.1
1,910,036	-		Rru_A1616	0.63	+1.3
1,910,038	-		Rru_A1616	0.63	+1.7
1,910,038	-		Rru_A1616	0.63	-0.1
1,910,038	-		Rru_A1616	0.63	+1.5
1,910,350	+				-0.1
1,910,350	+				-0.1
1,910,351	-				+1.3
1,910,571	+				-0.1
1,910,572	-				+3.3
1,910,572	-				+1.4
1,910,572	-				-0.1
1,910,572	-				-0.1
1,910,583	+				+1.2
1,910,584	-				+0.7
1,910,612	+				+0.4
1,910,613	-				-0.1
1,910,613	-				-0.1
1,910,704	+				-0.1
1,910,761	-				+0.5
1,911,193	+		Rru_A1617	0.50	-0.1
1,911,193	+		Rru_A1617	0.50	-0.1
1,911,193	+		Rru_A1617	0.50	-0.1
1,911,194	-		Rru_A1617	0.50	+0.9
1,911,522	+		Rru_A1617	0.86	-0.1
1,911,787	+		Rru_A1618	0.30	+0.9
1,911,788	-		Rru_A1618	0.30	+0.2
1,911,881	-		Rru_A1618	0.67	-0.1
1,911,985	-				-1.1
1,912,159	-		Rru_A1619	0.20	-0.1
1,912,203	+		Rru_A1619	0.28	+0.9
1,912,204	-		Rru_A1619	0.29	+0.5
1,912,226	+		Rru_A1619	0.33	+1.0
1,912,226	+		Rru_A1619	0.33	-0.1
1,912,226	+		Rru_A1619	0.33	+0.9
1,912,270	+		Rru_A1619	0.41	-0.1
1,912,270	+		Rru_A1619	0.41	-0.1
1,912,271	-		Rru_A1619	0.41	-0.1
1,912,271	-		Rru_A1619	0.41	-0.1
1,912,271	-		Rru_A1619	0.41	+0.3
1,912,324	+		Rru_A1619	0.51	+1.4
1,912,324	+		Rru_A1619	0.51	+0.9
1,912,325	-		Rru_A1619	0.52	-0.1