Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1543

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,816,149	+		Rru_A1542	0.34	+1.7
1,816,149	+		Rru_A1542	0.34	-0.1
1,816,150	-		Rru_A1542	0.34	+1.4
1,816,249	-		Rru_A1542	0.41	-0.1
1,816,327	+		Rru_A1542	0.46	+1.6
1,816,327	+		Rru_A1542	0.46	+1.0
1,816,327	+		Rru_A1542	0.46	-0.1
1,816,327	+		Rru_A1542	0.46	-0.1
1,816,328	-		Rru_A1542	0.46	+0.4
1,816,328	-		Rru_A1542	0.46	+0.5
1,816,328	-		Rru_A1542	0.46	+0.8
1,816,333	+		Rru_A1542	0.47	+1.6
1,816,333	+		Rru_A1542	0.47	+0.9
1,816,334	-		Rru_A1542	0.47	+0.4
1,816,334	-		Rru_A1542	0.47	+0.7
1,816,334	-		Rru_A1542	0.47	+1.7
1,816,626	+		Rru_A1542	0.66	+0.7
1,816,639	+		Rru_A1542	0.67	-0.1
1,816,639	+		Rru_A1542	0.67	+0.9
1,816,640	-		Rru_A1542	0.67	-1.7
1,816,640	-		Rru_A1542	0.67	+1.3
1,816,771	+		Rru_A1542	0.76	+1.2
1,816,771	+		Rru_A1542	0.76	+1.3
1,816,869	+		Rru_A1542	0.82	-0.1
1,816,869	+		Rru_A1542	0.82	-1.1
1,816,869	+		Rru_A1542	0.82	+1.4
1,816,869	+		Rru_A1542	0.82	-1.1
1,816,869	+		Rru_A1542	0.82	-0.1
1,816,870	-		Rru_A1542	0.82	+0.9
1,816,907	-		Rru_A1542	0.85	-0.1
1,817,023	+				-0.1
1,817,024	-				-0.1
1,817,047	+				-0.1
1,817,050	-				+0.8
1,817,131	+				+1.0
1,817,131	+				+0.5
1,817,131	+				+0.4
1,817,132	-				+1.2
1,817,132	-				-0.1
1,817,239	+		Rru_A1543	0.11	+0.9
1,817,240	-		Rru_A1543	0.11	-0.1
1,817,695	+		Rru_A1543	0.64	+0.3
1,817,695	+		Rru_A1543	0.64	+0.8
1,817,695	+		Rru_A1543	0.64	-0.1
1,817,695	+		Rru_A1543	0.64	-0.1
1,817,695	+		Rru_A1543	0.64	+0.7
1,817,696	-		Rru_A1543	0.64	-0.1
1,817,696	-		Rru_A1543	0.64	-1.7
1,818,095	+				+1.0
1,818,097	+				+1.3
1,818,134	+				+0.6
1,818,134	+				+0.8
1,818,134	+				+1.1
1,818,134	+				-0.1
1,818,134	+				-0.1
1,818,134	+				-0.1
1,818,134	+				-0.1
1,818,134	+				-1.7
1,818,134	+				-0.1
1,818,135	-				+0.7
1,818,169	+				-0.1
1,818,393	-				+1.1
1,818,411	+				-0.1
1,818,411	+				+1.5
1,818,411	+				+1.2
1,818,411	+				+0.8
1,818,411	+				+0.9
1,818,412	-				+0.9
1,818,412	-				-0.1
1,818,412	-				+1.4
1,818,412	-				+1.2
1,818,412	-				+0.8
1,818,474	+				-1.1
1,818,474	+				+1.5
1,818,476	+				-0.1
1,818,477	-				+1.3
1,818,514	+		Rru_A1544	0.11	-0.1
1,818,514	+		Rru_A1544	0.11	+1.1
1,818,515	-		Rru_A1544	0.11	-0.1
1,818,515	-		Rru_A1544	0.11	+0.9
1,818,665	+		Rru_A1544	0.18	+1.2
1,818,665	+		Rru_A1544	0.18	-0.1
1,818,666	-		Rru_A1544	0.18	-0.1
1,818,788	+		Rru_A1544	0.23	+1.3
1,818,789	-		Rru_A1544	0.23	-0.1
1,818,789	-		Rru_A1544	0.23	+0.7
1,818,829	+		Rru_A1544	0.25	-0.1
1,818,829	+		Rru_A1544	0.25	+1.2
1,818,829	+		Rru_A1544	0.25	+0.9
1,818,830	-		Rru_A1544	0.25	+1.2
1,818,929	+		Rru_A1544	0.29	-0.1
1,818,996	+		Rru_A1544	0.32	+1.3