Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1511

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,783,828	+				-0.1
1,783,828	+				-0.1
1,783,829	-				-0.1
1,783,829	-				+1.1
1,783,848	+				+1.1
1,784,142	+		Rru_A1510	0.19	-0.1
1,784,143	-		Rru_A1510	0.19	-0.1
1,784,229	+		Rru_A1510	0.32	+0.7
1,784,229	+		Rru_A1510	0.32	-0.1
1,784,229	+		Rru_A1510	0.32	-0.1
1,784,229	+		Rru_A1510	0.32	+0.1
1,784,230	-		Rru_A1510	0.32	+1.0
1,784,230	-		Rru_A1510	0.32	-2.1
1,784,230	-		Rru_A1510	0.32	-0.3
1,784,230	-		Rru_A1510	0.32	-0.1
1,784,269	+		Rru_A1510	0.38	-0.1
1,784,523	+		Rru_A1510	0.77	+0.9
1,784,524	-		Rru_A1510	0.77	+0.6
1,784,524	-		Rru_A1510	0.77	+1.5
1,784,619	+				+0.5
1,784,671	+				-1.1
1,784,671	+				+1.2
1,784,680	+				+0.6
1,784,680	+				+0.8
1,784,680	+				+1.5
1,784,680	+				+1.2
1,784,680	+				+0.4
1,784,680	+				-0.1
1,784,680	+				+1.2
1,784,681	-				+1.1
1,784,681	-				-0.1
1,784,681	-				-0.1
1,784,681	-				+1.3
1,784,741	+				+1.0
1,784,741	+				-1.7
1,784,741	+				-1.7
1,784,741	+				-0.1
1,784,742	-				-0.1
1,784,742	-				-1.7
1,784,742	-				+0.5
1,785,187	+		Rru_A1511	0.47	-0.1
1,785,187	+		Rru_A1511	0.47	-0.1
1,785,187	+		Rru_A1511	0.47	+1.0
1,785,188	-		Rru_A1511	0.47	+0.9
1,785,188	-		Rru_A1511	0.47	-0.1
1,785,188	-		Rru_A1511	0.47	+1.2
1,785,188	-		Rru_A1511	0.47	+1.1
1,785,188	-		Rru_A1511	0.47	+1.6
1,785,188	-		Rru_A1511	0.47	-1.1
1,785,188	-		Rru_A1511	0.47	+1.0
1,785,263	+		Rru_A1511	0.54	+1.2
1,785,263	+		Rru_A1511	0.54	-0.1
1,785,264	-		Rru_A1511	0.54	+1.3
1,785,264	-		Rru_A1511	0.54	-0.1
1,785,264	-		Rru_A1511	0.54	-0.1
1,785,264	-		Rru_A1511	0.54	-0.1
1,785,273	-		Rru_A1511	0.55	+0.1
1,785,273	-		Rru_A1511	0.55	+1.5
1,785,273	-		Rru_A1511	0.55	-0.1
1,785,273	-		Rru_A1511	0.55	-0.1
1,785,274	+		Rru_A1511	0.55	-0.1
1,785,275	-		Rru_A1511	0.55	+0.4
1,785,275	-		Rru_A1511	0.55	+0.9
1,785,275	-		Rru_A1511	0.55	-0.1
1,785,290	+		Rru_A1511	0.56	+0.7
1,785,494	+		Rru_A1511	0.75	+0.9
1,785,495	-		Rru_A1511	0.75	+1.4
1,785,495	-		Rru_A1511	0.75	-0.1
1,785,796	+				+0.8
1,785,821	+				+1.2
1,785,821	+				+0.8
1,785,821	+				+0.6
1,785,821	+				-0.1
1,785,821	+				+0.9
1,785,822	-				+0.7
1,785,822	-				-0.1
1,785,822	-				-0.1
1,785,896	+				+0.5
1,785,897	-				+1.5
1,785,930	-				+0.9
1,785,941	+				+0.4
1,785,942	-				-0.1
1,785,944	+				-0.1
1,785,944	+				-0.8
1,785,945	-				-0.1
1,785,964	+				-0.1
1,785,964	+				+0.9
1,785,965	-				-0.1
1,785,965	-				+0.7
1,786,076	-		Rru_A1512	0.18	-0.1
1,786,076	-		Rru_A1512	0.18	-0.1
1,786,205	-		Rru_A1512	0.62	-0.1
1,786,252	+		Rru_A1512	0.78	-0.1
1,786,252	+		Rru_A1512	0.78	-0.2
1,786,252	+		Rru_A1512	0.78	-0.1
1,786,252	+		Rru_A1512	0.78	+1.2
1,786,252	+		Rru_A1512	0.78	-0.1
1,786,252	+		Rru_A1512	0.78	+1.2
1,786,252	+		Rru_A1512	0.78	+1.2
1,786,253	-		Rru_A1512	0.78	-0.1
1,786,253	-		Rru_A1512	0.78	-0.1
1,786,265	-		Rru_A1512	0.82	+0.9
1,786,399	+		Rru_A1513	0.21	+0.4
1,786,400	-		Rru_A1513	0.22	-1.1
1,786,597	+		Rru_A1513	0.70	+0.9
1,786,598	-		Rru_A1513	0.70	+1.4
1,786,723	+				-0.1
1,786,724	-				+1.1
1,786,724	-				+1.3
1,786,724	-				+0.9
1,786,739	-				-0.1