Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1492

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,760,798	+		Rru_A1490	0.87	-0.1
1,760,798	+		Rru_A1490	0.87	+1.4
1,760,799	-		Rru_A1490	0.87	-1.1
1,760,799	-		Rru_A1490	0.87	+1.5
1,760,902	+				+1.0
1,760,902	+				+1.4
1,760,902	+				-0.1
1,760,902	+				-1.1
1,760,902	+				+0.4
1,760,902	+				-0.1
1,760,903	-				+0.4
1,760,903	-				+1.2
1,760,903	-				-0.1
1,760,903	-				-0.1
1,761,028	+				+1.1
1,761,028	+				-0.1
1,761,035	-				-0.1
1,761,035	-				+1.4
1,761,043	+				-0.1
1,761,044	-				+1.3
1,761,055	+				+0.6
1,761,055	+				-0.1
1,761,056	-				+1.0
1,761,073	+				+0.3
1,761,073	+				+1.5
1,761,073	+				+1.7
1,761,073	+				+1.1
1,761,073	+				+1.2
1,761,073	+				+0.9
1,761,074	-				+1.4
1,761,074	-				-0.1
1,761,074	-				+1.0
1,761,074	-				+1.0
1,761,074	-				-0.1
1,761,074	-				+1.5
1,761,074	-				+1.5
1,761,074	-				+1.1
1,761,074	-				+1.2
1,761,074	-				-0.1
1,761,074	-				-0.1
1,761,076	+				-0.1
1,761,076	+				+1.7
1,761,076	+				+1.2
1,761,076	+				+2.1
1,761,076	+				+2.0
1,761,076	+				-1.1
1,761,076	+				+0.3
1,761,077	-				-0.1
1,761,077	-				-0.1
1,761,077	-				+1.8
1,761,077	-				-0.6
1,761,077	-				+1.5
1,761,342	-		Rru_A1491	0.37	-0.0
1,761,962	+		Rru_A1492	0.14	+1.1
1,761,963	-		Rru_A1492	0.14	+1.2
1,762,086	+		Rru_A1492	0.23	+0.5
1,762,101	-		Rru_A1492	0.24	+0.9
1,762,101	-		Rru_A1492	0.24	+1.2
1,762,101	-		Rru_A1492	0.24	-0.1
1,762,134	-		Rru_A1492	0.26	+1.1
1,762,470	-		Rru_A1492	0.50	-0.1
1,762,470	-		Rru_A1492	0.50	+2.2
1,762,543	+		Rru_A1492	0.55	+0.8
1,762,634	+		Rru_A1492	0.61	-0.1
1,762,635	-		Rru_A1492	0.62	+1.1
1,762,654	+		Rru_A1492	0.63	-0.1
1,762,694	+		Rru_A1492	0.66	-0.1
1,762,694	+		Rru_A1492	0.66	+1.0
1,762,695	-		Rru_A1492	0.66	+1.3
1,762,695	-		Rru_A1492	0.66	+0.8
1,762,698	+		Rru_A1492	0.66	+2.4
1,762,698	+		Rru_A1492	0.66	+0.7
1,762,698	+		Rru_A1492	0.66	-1.7
1,762,699	-		Rru_A1492	0.66	+1.0
1,762,699	-		Rru_A1492	0.66	+1.2
1,762,699	-		Rru_A1492	0.66	+0.6
1,762,699	-		Rru_A1492	0.66	+1.1
1,762,699	-		Rru_A1492	0.66	+1.9
1,762,699	-		Rru_A1492	0.66	+0.5
1,762,699	-		Rru_A1492	0.66	+2.4
1,762,699	-		Rru_A1492	0.66	-1.5
1,762,699	-		Rru_A1492	0.66	+1.2
1,762,703	+		Rru_A1492	0.66	-0.1
1,762,703	+		Rru_A1492	0.66	+2.0
1,762,703	+		Rru_A1492	0.66	+0.6
1,762,703	+		Rru_A1492	0.66	+0.8
1,762,704	-		Rru_A1492	0.66	+1.6
1,762,704	-		Rru_A1492	0.66	-0.1
1,762,704	-		Rru_A1492	0.66	+0.9
1,762,796	+		Rru_A1492	0.73	+1.4
1,762,797	-		Rru_A1492	0.73	+2.7
1,762,948	+		Rru_A1492	0.84	+0.8
1,763,482	+		Rru_A1493	0.27	-0.1
1,763,482	+		Rru_A1493	0.27	-0.1
1,763,483	-		Rru_A1493	0.27	+0.4
1,763,483	-		Rru_A1493	0.27	-0.1