Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1395

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,645,777	+		Rru_A1394	0.46	+2.1
1,645,824	+		Rru_A1394	0.49	+0.8
1,645,824	+		Rru_A1394	0.49	+1.3
1,645,890	+		Rru_A1394	0.54	-0.1
1,645,891	-		Rru_A1394	0.54	-1.1
1,645,891	-		Rru_A1394	0.54	-0.1
1,645,955	-		Rru_A1394	0.58	+0.9
1,645,976	-		Rru_A1394	0.59	+0.9
1,645,976	-		Rru_A1394	0.59	-0.1
1,645,978	+		Rru_A1394	0.59	+0.5
1,645,978	+		Rru_A1394	0.59	+1.4
1,645,978	+		Rru_A1394	0.59	+1.0
1,645,980	+		Rru_A1394	0.59	-0.1
1,645,980	+		Rru_A1394	0.59	-0.1
1,645,981	-		Rru_A1394	0.60	+3.2
1,645,981	-		Rru_A1394	0.60	-0.1
1,645,992	+		Rru_A1394	0.60	-0.1
1,645,993	-		Rru_A1394	0.60	-0.1
1,645,993	-		Rru_A1394	0.60	+1.1
1,646,208	+		Rru_A1394	0.74	-0.1
1,646,320	-		Rru_A1394	0.81	+1.1
1,646,325	+		Rru_A1394	0.82	-0.1
1,646,358	+		Rru_A1394	0.84	+1.1
1,646,358	+		Rru_A1394	0.84	+2.5
1,646,359	-		Rru_A1394	0.84	-0.1
1,646,411	-		Rru_A1394	0.87	+0.9
1,646,498	-				-0.1
1,646,498	-				+0.9
1,646,600	-				+1.6
1,646,661	+				+0.4
1,646,976	+		Rru_A1395	0.38	-0.1
1,646,977	-		Rru_A1395	0.38	+1.9
1,646,977	-		Rru_A1395	0.38	+1.5
1,646,977	-		Rru_A1395	0.38	-0.1
1,647,012	+		Rru_A1395	0.43	+0.8
1,647,012	+		Rru_A1395	0.43	+1.1
1,647,013	-		Rru_A1395	0.43	-0.1
1,647,044	-		Rru_A1395	0.46	-0.1
1,647,045	+		Rru_A1395	0.46	+1.6
1,647,045	+		Rru_A1395	0.46	+2.8
1,647,045	+		Rru_A1395	0.46	-0.1
1,647,046	-		Rru_A1395	0.47	-0.1
1,647,046	-		Rru_A1395	0.47	+0.4
1,647,046	-		Rru_A1395	0.47	-1.1
1,647,046	-		Rru_A1395	0.47	+0.7
1,647,046	-		Rru_A1395	0.47	-0.1
1,647,142	+		Rru_A1395	0.58	+1.3
1,647,142	+		Rru_A1395	0.58	+1.4
1,647,142	+		Rru_A1395	0.58	+0.7
1,647,144	+		Rru_A1395	0.58	+0.8
1,647,249	+		Rru_A1395	0.71	+0.7
1,647,249	+		Rru_A1395	0.71	+1.0
1,647,249	+		Rru_A1395	0.71	-0.1
1,647,273	+		Rru_A1395	0.74	-1.1
1,647,274	-		Rru_A1395	0.74	+0.7
1,647,274	-		Rru_A1395	0.74	+1.0
1,647,717	+				+1.4
1,647,717	+				+1.0
1,647,717	+				-0.1
1,647,718	-				-0.1
1,647,746	+				+0.2
1,647,836	+				+0.9
1,647,837	-				+0.9
1,647,837	-				+1.3
1,647,837	-				+0.9
1,647,973	+				+1.1
1,648,144	-		Rru_A1396	0.18	+0.6
1,648,360	+		Rru_A1396	0.31	+1.7
1,648,361	-		Rru_A1396	0.31	+1.1