Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1364

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,603,783	-				-0.1
1,603,870	-				+1.0
1,603,897	+		Rru_A1363	0.12	+1.1
1,603,898	-		Rru_A1363	0.12	+1.3
1,603,898	-		Rru_A1363	0.12	-0.1
1,603,898	-		Rru_A1363	0.12	+1.3
1,603,898	-		Rru_A1363	0.12	+0.8
1,603,898	-		Rru_A1363	0.12	+1.6
1,603,898	-		Rru_A1363	0.12	+1.4
1,604,156	-		Rru_A1363	0.38	-0.1
1,604,156	-		Rru_A1363	0.38	+1.5
1,604,169	+		Rru_A1363	0.39	+1.1
1,604,170	-		Rru_A1363	0.39	+0.9
1,604,170	-		Rru_A1363	0.39	+1.3
1,604,170	-		Rru_A1363	0.39	-0.1
1,604,175	+		Rru_A1363	0.39	-0.1
1,604,176	-		Rru_A1363	0.40	-0.1
1,604,346	+		Rru_A1363	0.57	+0.6
1,604,346	+		Rru_A1363	0.57	-0.1
1,604,347	-		Rru_A1363	0.57	+0.9
1,604,347	-		Rru_A1363	0.57	-0.1
1,604,478	+		Rru_A1363	0.70	+1.3
1,604,479	-		Rru_A1363	0.70	-0.1
1,604,629	-		Rru_A1363	0.85	+1.3
1,604,770	+				+1.4
1,604,927	-		Rru_A1364	0.10	+1.2
1,604,927	-		Rru_A1364	0.10	+1.6
1,605,145	-		Rru_A1364	0.24	+1.2
1,605,188	-		Rru_A1364	0.27	+1.5
1,605,337	+		Rru_A1364	0.36	+1.8
1,605,337	+		Rru_A1364	0.36	-0.1
1,605,337	+		Rru_A1364	0.36	-0.1
1,605,337	+		Rru_A1364	0.36	-0.1
1,605,338	-		Rru_A1364	0.37	+1.4
1,605,338	-		Rru_A1364	0.37	+0.9
1,605,338	-		Rru_A1364	0.37	+1.4
1,605,338	-		Rru_A1364	0.37	+0.9
1,605,518	+		Rru_A1364	0.48	+0.8
1,605,519	-		Rru_A1364	0.48	+2.3
1,605,541	-		Rru_A1364	0.50	+1.2
1,605,541	-		Rru_A1364	0.50	+1.8
1,605,541	-		Rru_A1364	0.50	+1.9
1,605,992	-		Rru_A1364	0.79	+1.0
1,606,058	+		Rru_A1364	0.83	-0.1
1,606,058	+		Rru_A1364	0.83	-0.1
1,606,058	+		Rru_A1364	0.83	-0.1
1,606,059	-		Rru_A1364	0.83	-0.1
1,606,090	+		Rru_A1364	0.85	+0.6
1,606,090	+		Rru_A1364	0.85	+1.7
1,606,090	+		Rru_A1364	0.85	-0.1
1,606,090	+		Rru_A1364	0.85	-0.1
1,606,091	-		Rru_A1364	0.85	+1.3
1,606,091	-		Rru_A1364	0.85	+1.1
1,606,091	-		Rru_A1364	0.85	-0.1
1,606,091	-		Rru_A1364	0.85	-0.1
1,606,091	-		Rru_A1364	0.85	+0.9
1,606,091	-		Rru_A1364	0.85	+1.1
1,606,091	-		Rru_A1364	0.85	-0.1
1,606,091	-		Rru_A1364	0.85	-0.1
1,606,148	+		Rru_A1364	0.89	+1.0
1,606,149	-		Rru_A1364	0.89	-0.1
1,606,499	+				+0.6
1,606,499	+				-0.1
1,606,500	-				+1.2
1,606,500	-				-0.1
1,606,500	-				+0.7
1,606,500	-				+1.7
1,606,547	+				+0.8
1,606,548	-				-0.1
1,606,548	-				+0.8