Strain Fitness in Rhodospirillum rubrum S1H around Rru_A1338

Experiment: Succinic Acid; Light intensity 9 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Succinic Acid; Light intensity 9 uM
1,574,317	+		Rru_A1337	0.42	+1.7
1,574,318	-		Rru_A1337	0.42	+1.2
1,574,318	-		Rru_A1337	0.42	+0.5
1,574,318	-		Rru_A1337	0.42	+1.1
1,574,714	+		Rru_A1337	0.67	+0.4
1,575,185	+				+1.2
1,575,185	+				-0.1
1,575,511	+		Rru_A1338	0.28	+0.8
1,575,511	+		Rru_A1338	0.28	+1.4
1,575,511	+		Rru_A1338	0.28	-0.1
1,575,511	+		Rru_A1338	0.28	+1.0
1,575,511	+		Rru_A1338	0.28	-0.1
1,575,511	+		Rru_A1338	0.28	-1.1
1,575,511	+		Rru_A1338	0.28	+1.1
1,575,511	+		Rru_A1338	0.28	+1.2
1,575,511	+		Rru_A1338	0.28	+0.8
1,575,512	-		Rru_A1338	0.28	+1.7
1,575,512	-		Rru_A1338	0.28	+1.6
1,575,512	-		Rru_A1338	0.28	-0.1
1,575,512	-		Rru_A1338	0.28	-0.1
1,575,512	-		Rru_A1338	0.28	+1.5
1,575,512	-		Rru_A1338	0.28	+0.4
1,575,512	-		Rru_A1338	0.28	-0.1
1,575,512	-		Rru_A1338	0.28	-0.1
1,575,512	-		Rru_A1338	0.28	-0.1
1,575,512	-		Rru_A1338	0.28	+1.3
1,575,670	+		Rru_A1338	0.43	+1.5
1,575,670	+		Rru_A1338	0.43	+0.8
1,575,670	+		Rru_A1338	0.43	-0.1
1,575,671	-		Rru_A1338	0.43	+1.6
1,575,754	+		Rru_A1338	0.51	+2.0
1,575,754	+		Rru_A1338	0.51	+1.4
1,575,754	+		Rru_A1338	0.51	-0.1
1,575,808	+		Rru_A1338	0.56	+1.2
1,575,808	+		Rru_A1338	0.56	+1.3
1,575,808	+		Rru_A1338	0.56	+1.5
1,575,808	+		Rru_A1338	0.56	+0.8
1,575,808	+		Rru_A1338	0.56	-0.1
1,575,808	+		Rru_A1338	0.56	-0.1
1,575,808	+		Rru_A1338	0.56	+1.2
1,575,809	-		Rru_A1338	0.56	+1.5
1,575,809	-		Rru_A1338	0.56	+1.2
1,575,809	-		Rru_A1338	0.56	+0.9
1,575,809	-		Rru_A1338	0.56	-0.1
1,575,809	-		Rru_A1338	0.56	+1.2
1,575,883	+		Rru_A1338	0.64	+1.0
1,575,883	+		Rru_A1338	0.64	+1.4
1,575,883	+		Rru_A1338	0.64	+0.8
1,575,884	-		Rru_A1338	0.64	+0.8
1,575,925	+		Rru_A1338	0.68	+0.8
1,575,926	-		Rru_A1338	0.68	-0.1
1,575,961	+		Rru_A1338	0.71	+0.9
1,575,961	+		Rru_A1338	0.71	-0.1
1,575,962	-		Rru_A1338	0.71	+0.9
1,576,276	+				+1.1
1,576,276	+				-0.1
1,576,332	-				+0.5
1,576,514	+		Rru_A1339	0.22	-0.0
1,576,528	+		Rru_A1339	0.23	-0.1
1,576,528	+		Rru_A1339	0.23	-0.1
1,576,688	+		Rru_A1339	0.38	-0.1
1,576,688	+		Rru_A1339	0.38	+0.6
1,576,689	-		Rru_A1339	0.38	-0.1
1,576,689	-		Rru_A1339	0.38	+0.4
1,576,689	-		Rru_A1339	0.38	+0.4
1,576,689	-		Rru_A1339	0.38	-0.1
1,576,744	+		Rru_A1339	0.43	+0.2
1,576,745	-		Rru_A1339	0.43	-0.1
1,576,745	-		Rru_A1339	0.43	+0.8
1,576,745	-		Rru_A1339	0.43	-0.1
1,576,808	+		Rru_A1339	0.49	+0.9
1,576,808	+		Rru_A1339	0.49	-0.1
1,576,808	+		Rru_A1339	0.49	+0.9
1,576,808	+		Rru_A1339	0.49	-0.1
1,576,809	-		Rru_A1339	0.49	+0.6
1,576,809	-		Rru_A1339	0.49	-0.1
1,576,809	-		Rru_A1339	0.49	+1.5
1,576,809	-		Rru_A1339	0.49	+2.7
1,576,809	-		Rru_A1339	0.49	-1.7
1,576,809	-		Rru_A1339	0.49	-0.1
1,576,809	-		Rru_A1339	0.49	-0.1
1,576,809	-		Rru_A1339	0.49	-0.7
1,576,809	-		Rru_A1339	0.49	+0.9
1,576,810	+		Rru_A1339	0.49	-0.1
1,576,811	-		Rru_A1339	0.49	+0.6
1,576,957	+		Rru_A1339	0.62	-0.1
1,576,958	-		Rru_A1339	0.63	-0.1
1,577,209	+		Rru_A1339	0.86	-0.1
1,577,209	+		Rru_A1339	0.86	-0.1
1,577,209	+		Rru_A1339	0.86	-0.1
1,577,209	+		Rru_A1339	0.86	-0.1
1,577,209	+		Rru_A1339	0.86	-0.1